Corynebacterium halotolerans: A605_08290
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Entry
A605_08290 CDS
T02472
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
chn
Corynebacterium halotolerans
Brite
KEGG Orthology (KO) [BR:
chn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chn03021
]
A605_08290
Transcription machinery [BR:
chn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A605_08290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AGF72660
UniProt:
M1NYS8
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All DBs
Position
1802135..1803124
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AA seq
329 aa
AA seq
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MTIPSPQEYDAEEHDRGSRRGQTNDNPAADLVRVYLNGIGKTALLTAEDEVELAQRIEVG
LYADYLLKNSEEPLTRAKKRDLKVLAKEGNKARAHLLEANLRLVVSLAKRYTGRGMPLLD
LIQEGNLGLIRAMEKFDYAKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHLVEQVNKL
SRIKRELYQHLGREATNEELSEESGIDESKIEMLLRQSRDPVSLDMPVGADEEAPLGDFI
EDAEATDAETAVVASLRHSDIRSVLGTLEQREQDVIRLRYGLDDGVPRTLDQIGRKFGLS
RERVRQIEREVMSKLRDGERAARLREYAL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgactattccttccccgcaggagtacgacgcagaggagcacgaccgcggaagccgtcgt
ggccagaccaacgataacccggcggccgatcttgtccgtgtctatctcaacggcatcggc
aagaccgccctgctcaccgcagaggacgaggtggaactcgcccagcgcatcgaagtggga
ctgtacgccgattacctgctcaagaactccgaggagcctctgacccgcgcgaagaagcgc
gacctgaaggtgctggcgaaggagggaaacaaggcccgcgcccacctgctggaggccaat
ctccgcctggtggtctccctggccaagcggtacacgggacgcggtatgccgctgctcgac
ctgatccaggagggcaacctgggcctcatccgtgcgatggagaagttcgactacgccaag
ggcttcaagttctccacctacgccacctggtggatccggcaggccatcacccgtggcatg
gccgatcagtcccgcaccatccggctgcccgtccacctggtcgagcaggtcaacaagctc
tcccgcatcaagcgcgagctctaccagcacctgggccgcgaggccaccaatgaggagctg
tccgaggaatcgggcatcgacgagtccaagatcgagatgctgctgcgccagtcccgcgac
ccggtgagcctggacatgccggtcggggcggacgaggaggccccgctgggcgacttcatc
gaggacgccgaggccaccgacgccgagaccgccgtcgtcgcctccctgcgccactccgac
atccgctccgtgctcggcacgctggagcagcgcgagcaggacgtcatccggctgcgctac
ggcctggacgacggtgtcccccgcaccctcgatcagatcggccgcaagttcggtctctcc
cgtgagcgggtccgtcagatagagcgtgaggtcatgagcaagctgcgggacggcgagcgc
gccgcccgcctgcgcgagtacgcgctgtaa
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