Cryptosporidium hominis: Chro.60056
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Entry
Chro.60056 CDS
T00210
Name
(RefSeq) CCAAT-box DNA binding protein subunit B
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cho
Cryptosporidium hominis
Pathway
cho03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cho00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Chro.60056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cho03019
]
Chro.60056
Messenger RNA biogenesis [BR:
cho03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
Chro.60056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
3413174
NCBI-ProteinID:
XP_665659
LinkDB
All DBs
Position
6
AA seq
327 aa
AA seq
DB search
MSGNNLEDNISKNNNGTKNEDYDENDNEDDDEDITFLICGGNEEGGLKDFSKLNDKISST
GGDNEVDNSINPASDVLKKGMTDCKPGNTGASNSNSSNINNQKMNTGDQNLHALNVSNTI
YIDNEDTATEENPCKNLQMVWDNNPELRPWSRLLDVSPWFNYGFTEKTFKEYIIRQLGIR
WERIKKQNIETSDDLLNKSTITSGISNSNNVNANLNINNSSTGLPNPNIKMMNNLPPPPP
ITGFPSNMIYFPPPPPPHLNPPIPGHPNMYHQQHMFNNFPHHIPHHSHIPPPIPSHQIMH
HPGLPPNNMNPGANTAFNARSKKRPAE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggaataatttggaagataatatttcaaagaataataatggaacaaagaatgaa
gattatgatgagaatgataatgaagatgatgatgaagatataacttttttaatttgcgga
ggaaatgaagaaggaggattgaaagatttttcaaaattgaatgataagataagttcaaca
ggtggtgataatgaagtagacaattcaattaatccggcttcagatgttttgaagaaagga
atgacggattgcaaacctggaaatacaggagcaagtaatagtaactcttcaaatataaat
aatcaaaaaatgaacacaggagaccaaaatttacatgctttaaatgtttctaatacaata
tatattgacaatgaagatacagccacagaagaaaatccatgtaaaaatcttcaaatggtt
tgggataataacccagagttaaggccttggagtagattactggatgtttcaccttggttt
aattatggctttacagaaaaaacatttaaagaatatattattagacaattaggtattaga
tgggaacgtattaagaaacaaaacattgaaacaagtgatgatttactaaacaagagtaca
ataacatctggtatttctaactcaaataatgtgaatgcaaatttaaatattaataattca
agtactggtttaccaaatccaaatattaagatgatgaataatttaccaccgccaccacct
ataacagggttcccatcaaatatgatttatttcccacctccacccccaccacacttaaat
ccaccaattccaggtcatccaaatatgtatcatcaacagcacatgttcaacaactttcct
catcacatccctcatcattcgcacattccacctccaataccttctcatcaaattatgcac
caccctggattaccgccaaataatatgaatccgggcgccaacaccgcatttaatgcaagg
agcaaaaaaagacctgcagagtaa
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