Chondrocystis sp. NIES-4102: NIES4102_34400
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Entry
NIES4102_34400 CDS
T05085
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
chon
Chondrocystis sp. NIES-4102
Pathway
chon03030
DNA replication
chon03430
Mismatch repair
chon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIES4102_34400
03430 Mismatch repair
NIES4102_34400
03440 Homologous recombination
NIES4102_34400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chon03032
]
NIES4102_34400
03400 DNA repair and recombination proteins [BR:
chon03400
]
NIES4102_34400
Enzymes [BR:
chon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIES4102_34400
DNA replication proteins [BR:
chon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIES4102_34400
DNA repair and recombination proteins [BR:
chon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIES4102_34400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Hus1
Motif
Other DBs
NCBI-ProteinID:
BAZ46409
UniProt:
A0A1Z4RVB9
LinkDB
All DBs
Position
complement(3911812..3912795)
Genome browser
AA seq
327 aa
AA seq
DB search
MPVYLYWGEDDFSLTQAVEKLQAQVLDSNWLQFNYHKLIGDRSETIIEGFNQVMTPVFGA
GERLVWLAQTNLCEQKPDDQVLNELKRTLEFIPTSSHLLLTTEKKPDGRLASTKLLNQYA
SVKDFSLIPPWKTDLIAAKIKEIAQVINLPLTPSAIALLTDSVGNDTRQLWNELQKLKIF
WGDQSQPLDEDSISALVICNTQNSLKLATAIKNGKAATALSLITDLINHNEPPLKIVATL
VGQFRTWTIVKLMQELGQTDNKALATAAGINNPNRLYFIRQEISQTTTQQLLAVLPQLLE
LEYHLKTGAAAWEILQTKVVELSLLFI
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtttatttatattggggagaagatgatttttccctaacccaagctgtagaaaaa
ttacaagctcaagttcttgattctaattggttacagtttaattatcataaattaattggc
gatcgctctgaaactattattgaaggttttaatcaggtgatgactcctgtcttcggtgca
ggggaacgtttggtatggttggctcaaactaatctttgtgaacaaaaacctgatgatcaa
gttttaaatgaacttaaacgtactctagagtttattcctacttcatctcatctacttcta
actaccgaaaaaaaacccgacggacgattagcttctactaaacttttaaatcaatatgcc
tcggttaaagattttagccttattccaccttggaaaactgatttaattgctgccaaaatt
aaggaaatagctcaagtaattaatcttccattaacccctagcgcgatcgctctacttact
gattctgttggtaatgatactcggcaattatggaatgaattacagaaattaaaaattttt
tggggtgatcaatctcaaccattagatgaagatagtatttccgcccttgttatctgtaat
actcaaaatagtctaaagcttgcaacagctattaaaaatggaaaggctgcaacagcttta
agtttaatcacagatttaattaatcacaatgaaccacccctaaagatcgtagccacttta
gtcggacaatttcgcacttggactatagttaaattaatgcaagagttgggacaaaccgat
aataaagcgctcgctactgctgctggtattaataaccccaaccgtctttattttatccgt
caagaaatttctcaaactacaacccaacagttactcgctgtcttaccgcaattattggag
ttggaatatcatcttaaaacaggtgcagcagcttgggaaattctacaaactaaagtggtt
gaattatctcttttgtttatttaa
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