Caulobacter henricii: AQ619_14785
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Entry
AQ619_14785 CDS
T04110
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
chq
Caulobacter henricii
Pathway
chq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
chq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AQ619_14785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chq03021
]
AQ619_14785
03400 DNA repair and recombination proteins [BR:
chq03400
]
AQ619_14785
Enzymes [BR:
chq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AQ619_14785
Transcription machinery [BR:
chq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AQ619_14785
DNA repair and recombination proteins [BR:
chq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AQ619_14785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Biotin_lipoyl_2
ERp29
Motif
Other DBs
NCBI-ProteinID:
ALL14510
UniProt:
A0A0P0P2N0
LinkDB
All DBs
Position
complement(3159823..3164013)
Genome browser
AA seq
1396 aa
AA seq
DB search
MNQEVLNIFNPVQAAPTFDQIRISLASPEKIRSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPTKDYECLCGKYKRMKYKGIICEKCGVEVTLARVRRERMGHIELASPVAHIWFLKS
LPSRIAMMLDMPLKDIERVLYFEYYIITEPGLTPLKQHQLLSEDDYMRAQEEYGDDSFTA
EIGAEAVQNLLKAIDLDKEADRLREELAGTVSDMKQKKFSKRLKILEAFSESGNRPEWMV
LTVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PDLKLHECGLPKKMALELFKPFIYARLDAKGLSGTVKQSKRMVEREQPQVWDILEEVIRE
HPVLLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILSPANGRPIIVPSQDIVLGLYYLSVARDGEPGEGKIFSDIAEIEAAMD
AGVVSLHAKIKSRFTEVDADGVARRRVIDTTPGRMKIAALLPRHPQVGHRLIEKALTKKE
IGNLIDIVYRHCGQKATVIFADQIMGLGFKEAAKAGISFGKDDIIIPQRKEAIVAETRSL
AEEYEQQYADGLITKGEKYNKVVDAWAKATDRVADEMMAELQMKHKDENGREKEINAIYM
MAHSGARGSQAQMKQLGGMRGLMAKPSGEIIETPIVSNFKEGLTVQEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIIVEEDCGTTRGITLRAVVEGGDVLVSLGARVLGRFS
AEDIKDPATGELVVPADTYLDENMADAIEAAAVQSVKVRSVLTCEAKIGVCGACYGRDLA
RGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGTAQVAEQSFFESSNDGTVRVTGATV
TGADGFLVVMSRNTAVSVLVDGKERENYKPPYGARLKIKDGEKVKRGQRLADWDPYTTPI
ITEVAGRIRAEDLVDGFSVREETDEATGIAQRVIADWRTSARASDLRPAMGVLGEDGSYV
RLANGGEARYLMSVGAILSVADGDMVKPGEVIARIPTEGAKTRDITGGLPRVAELFEARR
PKDCAVIAEMDGRVEFGKDYKNKRRIKITPEVDADGNQGEPVEFLIPKGKHIAVHDGDFI
ARGEYIIDGNLDPHDILRILGVEALANFLVDEIQEVYRLQGVPINDKHIETIVRQMLQKV
EILEPGDTGLIKGDQLDKPEFYIEQDRAVARGGRPATTQPVLLGITKASLQTKSFISAAS
FQETTRVLTEASVHGKTDTLEGLKENVIVGRLIPAGTGSYLRSLQRVAAKRDEQLAQQRE
DAMEPLPEAIALADAE
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaagtcctgaacatcttcaatccggtccaggccgctccgaccttcgaccag
atccgtatttcgctggcttcgcctgaaaagatccgctcgtggtcgttcggcgagatcaag
aagccggaaaccatcaactaccgtacgttcaagcccgagcgtgacggcctgttctgcgcc
cgtatctttggcccgaccaaggactacgaatgcctgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgaaaagtgcggtgttgaagtcaccctggcccgcgtccgtcgc
gagcgcatgggccacatcgaactggcctcgccggtcgcgcacatctggttcctgaagtcg
ctgccctcgcgcatcgccatgatgctcgacatgccgctgaaggacatcgagcgcgtcctg
tacttcgaatactacatcatcaccgagccgggcctgaccccgctgaagcagcaccagctg
ctcagcgaggacgactatatgcgcgcccaggaagaatacggcgatgacagcttcaccgcc
gagatcggtgccgaggccgtgcagaacctgctgaaggcgatcgacctcgacaaggaagcc
gaccgcctgcgtgaagagctggccggcaccgtgtcggacatgaagcagaagaagttcagc
aagcgcctgaagatcctcgaagccttctcggaatcgggcaaccgccccgagtggatggtg
ctgacggtcgtgccggtgatcccgccggaactgcgcccgctggtgccgctggacggcggc
cgcttcgccacctccgacctgaatgacctctatcgccgggtcatcaaccgcaacaaccgc
ctgaagcgcctgatcgagctgcgcgcccctgacatcatcatccgcaacgaaaagcggatg
ctgcaggagtcggtcgacgccctgttcgacaacggccgtcgcggtcgcgtcatcaccggc
gccaacaagcgtccgctgaagtcgctggccgacatgctgaagggcaagcagggtcgcttc
cgtcagaacctgctcggcaagcgcgtcgactattcgggccgctcggtcatcgtggtcggt
cccgacctgaagctgcacgaatgcggcctgcccaagaagatggcactcgagctgttcaag
ccgttcatctatgcgcgtctggacgccaagggcctgtcaggcaccgtcaagcagtccaag
cgcatggtcgagcgcgaacagccccaggtgtgggacatcctcgaagaggtgatccgcgag
cacccggtcctgctgaaccgcgcgccgacgcttcaccgtctgggcatccaggcgttcgag
cccaagctgatcgagggcaaggccatccagctgcacccgctggtctgcgccgccttcaac
gccgacttcgacggcgaccagatggccgttcacgtcccgctgagccttgaggcccagctg
gaagcccgcgtcctgatgatgtcgaccaacaacatcctgtcgcccgccaacggtcgcccg
atcatcgtgccgtcgcaggacatcgtcctgggtctgtactatctgtcggtcgcccgcgac
ggcgagccgggtgaaggcaagatcttcagcgacatcgccgaaatcgaagccgccatggac
gccggcgtcgtcagcctgcacgccaagatcaagtcgcgcttcacggaagtggacgccgat
ggcgtggcacgtcgccgcgtgatcgacaccacgcctggccggatgaagatcgccgccctg
ctgccgcgtcacccgcaggtgggtcaccgcctgatcgaaaaggcgctgaccaagaaggaa
atcggcaatctgatcgacatcgtctaccgccactgcggtcagaaggcgacggtcatcttt
gccgaccagatcatgggtctgggcttcaaggaagcggccaaggccggcatttccttcggc
aaggacgacatcatcatcccgcagcggaaagaggccatcgtcgccgaaacccgctcgctg
gctgaagaatatgagcagcagtacgccgacggcctgatcaccaagggtgagaagtacaac
aaggtcgttgacgcctgggccaaggccaccgatcgcgtcgctgacgagatgatggccgag
cttcagatgaagcataaggacgagaacggccgcgagaaggaaatcaacgccatctacatg
atggcccactccggtgctcgtggttcgcaggcccagatgaagcagctgggcggcatgcgc
ggtctgatggccaagccctcgggcgagatcatcgagaccccgatcgtctcgaacttcaag
gaaggcctgaccgttcaggagtacttcaactccacccacggtgcccgtaagggtctggcc
gacaccgcgctgaagaccgccaactcgggttacctgacccgtcgtctggtcgacgtcgcg
caggactgcatcatcgtcgaggaagactgcggcaccacgcggggcatcaccctgcgcgcc
gtcgtcgagggcggcgacgttctggtctcgctgggcgcccgcgtcctgggccgtttctcg
gccgaggacatcaaggacccggcgaccggcgagctggtcgttccggccgatacctatctc
gacgaaaacatggccgacgccatcgaggcggctgccgtgcagtcggtgaaagtgcgttcg
gtcctgacctgcgaagccaagatcggcgtctgcggtgcctgctacggccgcgacctggcc
cgtggtaccccggtcaacatcggtgaagcggtcggcgtcatcgccgcccagtccatcggt
gagcccggcacccagctgacgatgcgaaccttccacatcggcggcaccgcccaggtggcc
gagcagtcgttcttcgaaagcagcaacgacggtacggtccgcgtgaccggtgccaccgtg
accggcgccgacggcttcctggtcgtgatgagccgcaacacggccgtcagcgtcctggtc
gacggcaaggaacgcgaaaactacaagccgccttacggcgcgcgcctgaagatcaaggac
ggcgagaaggtcaagcgcggacagcgcctggccgattgggacccctacaccaccccaatc
atcaccgaagtcgccggccgcattcgcgccgaagacctggtggacggcttctccgtccgc
gaggaaaccgacgaagccaccggtatcgcgcaacgcgtgatcgccgactggcgcacctcg
gcccgcgcttcggacctgcgtccggccatgggcgtgctgggcgaagacggctcctatgtc
cgtctggctaacggcggcgaggctcgctacctgatgtcggtcggggccattctgtcggtg
gccgatggcgacatggtcaagccgggcgaggtcatcgcacggatcccgaccgaaggtgcc
aagacccgcgacatcaccggcggtctgccacgcgtcgccgaactcttcgaagcccgccgt
ccgaaggactgcgcggtcatcgcggaaatggacggtcgcgtcgaattcggcaaggattac
aagaataagcgccgtatcaagatcaccccggaagtcgatgcagacggcaaccaaggcgag
ccggtcgagttcctgatccccaagggcaagcacatcgcagtgcacgatggcgacttcatc
gcgcgcggcgagtacatcatcgacggcaacctggatccgcacgacatcctgcgcatcctc
ggcgtcgaggccctggccaacttcctcgtggacgaaatccaggaggtctatcgactgcag
ggcgtgccgatcaacgacaagcacatcgagacgatcgttcgtcagatgctgcagaaggtc
gagatcctggagccgggcgatacgggcctgatcaagggcgatcagctcgacaagcccgag
ttctacatcgagcaggaccgcgccgtcgcgcggggtggtcgtccggccaccacccagccg
gtgctgctcggtatcaccaaggcctcgctgcaaaccaagagcttcatctcggccgcgtcg
ttccaggaaacgacccgcgtcctgaccgaagcctcggtgcacggcaagaccgacaccctg
gaaggcctgaaggaaaacgtcatcgtgggtcgcctgatccccgccggtacgggttcctat
ctgcgcagcctgcagcgcgtcgccgccaagcgcgacgagcaactggcccagcagcgtgaa
gatgcgatggagcctcttcccgaggccatcgccctcgccgacgccgaatag
DBGET
integrated database retrieval system
