Caulobacter henricii: AQ619_14790
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Entry
AQ619_14790 CDS
T04110
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
chq
Caulobacter henricii
Pathway
chq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
chq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AQ619_14790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chq03021
]
AQ619_14790
03400 DNA repair and recombination proteins [BR:
chq03400
]
AQ619_14790
Enzymes [BR:
chq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AQ619_14790
Transcription machinery [BR:
chq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AQ619_14790
DNA repair and recombination proteins [BR:
chq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AQ619_14790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
ALL14511
UniProt:
A0A0P0P216
LinkDB
All DBs
Position
complement(3164113..3168183)
Genome browser
AA seq
1356 aa
AA seq
DB search
MAQSFTGKKRIRKSFGRIPEAVQMPNLIEVQRSSYEQFLQREVRPGQRRDEGIEAVFKSV
FPIKDFNERAVLEYVSYEFEEPKYDVEECIQRDMTFAAPLKVKLRLIVFETEEETGARSV
KDIKEQDVYMGDIPLMTDKGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHASGKLLFAA
RVIPYRGSWLDFEFDAKDVVYVRIDRRRKLPATTFLYALGMDGEEILTTFYDVVPFEKRE
GGWATPYKPERWRGVKPEFALVDGDTGEEVAPAGTKITARQAKKLADNGLKILLLAPEAL
TGRYLARDAVNFENGEIYAEAGDELDVTSIQALADQGFSTIDVLDIDHVTVGAYMRNTLR
VDKNAVREDALFDIYRVMRPGEPPTVEAAEAMFKSLFFDAERYDLSAVGRVKMNMRLELD
ASDEMRVLRKEDVLAVLKLLVGLRDGRGEIDDIDNLGNRRVRSVGELLENQYRVGLLRME
RAIKERMSSVDIDTVMPHDLINAKPAAASVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
LGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATHARVNKYGFIESPYR
RVADGKPLDEVVYMSAMEESKHVIAQSNIKVLNGEIVDDLVPGRINGEPTLLQKEQVDLM
DVSPRQVVSVAAALIPFLENDDANRALMGSNMQRQAVPLVQSDAPLVGTGMEAVVARDSG
AVVVAKRTGVVEQIDGTRIVVRATEETDAARSGVDIYRLSKFQRSNQSTCINQRPLVKVG
DKISAGDIIADGPSTELGELALGRNALVAFMPWNGYNFEDSILISERIVRDDVFTSIHIE
EFEVMARDTKLGPEEITRDIPNVGEEALRNLDEAGIVAIGAEVQPGDILVGKVTPKGESP
MTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVDVRVFNRHGVDKDERALAIERSEID
RLGKDRDDEFAILNRNISGRLRELLIGNVALSGPKGLSRGEITADKLAEIQPGLWWQIAL
EDEKAMGELESLRRLFDENRKRLDRRFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQP
GDKMAGRHGNKGVISRILPIEDMPFLADGTHVDVVLNPLGVPSRMNVGQIFETHLGWACA
GLGKQITALLEDWQAGGQKQALVERLTEIYGPDEELPDTEEGLVELARNLGKGVPIATPV
FDGARIGDIEDHLRMAGLDPSGQSILYDGQTGEQFKRPVTVGYIYMLKLHHLVDDKIHAR
SIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYE
SIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELENS
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaatcgttcaccggcaagaagcggatccggaagtctttcggccgcatccccgaa
gctgtgcagatgccgaacctgatcgaggttcagcgctcctcctatgaacagttccttcag
cgcgaggtccgtccgggccagcgccgcgacgagggcattgaagcggtcttcaagtccgtc
ttcccgatcaaggatttcaacgagcgcgcggtgctcgaatacgtctcgtacgaattcgaa
gagcccaagtacgacgttgaagagtgcatccagcgcgacatgaccttcgcggcgccgctg
aaggtcaagctgcgtctgatcgtgttcgaaaccgaagaagaaaccggcgcccggtccgtc
aaggacatcaaggagcaggacgtctacatgggcgatatcccgctcatgaccgacaagggt
accttcatcgtcaacggcaccgagcgggtcatcgtctcgcagatgcaccgttcgcctggc
gtgttcttcgaccacgacaagggcaagacccatgcctcgggcaagctgctgttcgccgcc
cgcgtcattccctatcgtggctcgtggctggacttcgagttcgacgccaaggacgtggtc
tatgtccgcatcgaccgtcgccgcaagctgcccgccaccaccttcctctatgccctgggc
atggacggagaagagatcctgacgacgttctacgacgtcgtcccgttcgagaagcgcgaa
ggcggctgggccaccccctacaagcccgagcgctggcgcggcgtgaagccggagttcgcc
ctcgttgacggcgacaccggtgaggaagtcgctccggccggcaccaagatcaccgcccgt
caggccaagaagctggccgacaacggtctgaagatcctgctgctggctcctgaagccctg
accggccgttatctggcccgcgacgccgtcaacttcgagaacggcgaaatctacgccgaa
gccggcgacgagctggacgtcacctcgatccaggccctggccgatcaaggcttcagcacc
atcgacgtgctggacatcgaccacgtcacggtcggcgcctacatgcgcaacaccctgcgc
gtggacaagaacgccgtccgtgaggacgccctgttcgacatctatcgcgtcatgcgtccg
ggcgagccgccgaccgtcgaagctgctgaagcgatgttcaagtcgctgttcttcgacgcc
gagcgctacgacctgtcggccgtcggccgtgtgaagatgaacatgcgcctggagctggac
gcttcggacgagatgcgcgtgctccgcaaggaagacgtgctggccgtcctgaagctgctg
gtcggcctgcgcgatggtcgcggcgaaatcgacgacatcgacaacctcggcaaccgccgg
gtccgttcggtcggcgaactgctggaaaaccagtaccgcgtcggcctgctgcgcatggaa
cgcgccatcaaggaacgcatgtcgtccgtcgacatcgacaccgtgatgccgcacgacctg
atcaacgccaagccggccgccgcctcggtccgcgaattcttcggctcctcgcagctgtcg
cagttcatggaccagaccaacccgctgtcggaaatcacccacaagcgtcgtctctcggcg
ctcggcccgggcggtctgacccgtgagcgcgccggcttcgaagtccgcgacgttcacccg
acccactacggccgcatctgcccgattgaaacgccggaaggcccgaacatcggtctgatc
aactcgctggccacccatgcccgcgtcaacaagtacggcttcatcgagagcccttaccgt
cgcgtcgccgacggcaagccgctcgacgaggtcgtctacatgtcggccatggaagagtcg
aagcacgtcatcgcccagtccaacatcaaggtgttgaacggcgagatcgtcgacgacctg
gtgcccggccggatcaacggcgaacccaccctgctccagaaggaacaggtggacctgatg
gacgtgtcgccgcgtcaggtggtttcggtggccgcggccctgatccccttcctcgaaaac
gatgacgccaaccgcgccctcatgggctcgaacatgcaacgtcaggccgtgccgctggtg
cagtccgacgcgccgctggtcggtacgggcatggaagccgtggtcgcccgcgactccggc
gccgtggtcgtggccaagcgcaccggcgtggtcgagcagatcgacggtacccgtatcgtc
gtccgcgccaccgaagagaccgacgccgcccgttcgggcgtcgacatctaccgtctgtcc
aagttccagcgttccaaccagtcgacctgcatcaatcagcgcccgctggtgaaggtgggc
gacaagatcagcgccggcgacatcatcgctgacggtccctcgaccgagctcggcgagctg
gccctgggccgcaacgcgctcgtcgcgttcatgccctggaacggctacaacttcgaagac
tcgatcctgatctccgaacgcatcgtccgcgacgacgtcttcacctcgatccacatcgag
gaattcgaagtcatggcccgcgacaccaagctcggtccggaagaaatcacccgcgacatc
ccgaacgtcggcgaggaagccctgcgcaacctcgacgaagccggcattgtggcgatcgga
gccgaagtccagccgggcgacatcctggtcggcaaggtcactccgaagggcgaaagcccg
atgacgccggaagaaaagctcctgcgcgccatcttcggcgaaaaggcctctgacgtccgc
gacaccagcctgcgcctgcccccgggcgtcgccggcacgatcgtcgatgtccgcgtgttc
aaccgtcacggcgtcgacaaggacgaacgcgccctggccatcgagcgctcggaaatcgac
cgcctgggcaaggaccgcgacgacgaattcgcgatcctgaaccgcaacatctcgggccgt
ctgcgcgagctgctgatcggcaatgtggccctgtcgggtcccaagggcctgtcgcgcggc
gagatcaccgccgacaagctggctgaaatccagccgggcctgtggtggcagatcgctctc
gaagacgagaaggcgatgggcgaactggaaagcctgcgccgtctgttcgacgagaaccgc
aagcgtctggaccgccgcttcgaggacaaggtcgacaagctgcagcgcggcgacgaactg
cccccgggcgtgatgaagatggtcaaggtcttcgtggccgtgaagcgcaagcttcagccc
ggcgacaagatggccggccgtcacggcaacaagggcgtcatctcgcgcatcctgccgatc
gaggacatgccgttcctcgccgacgggacgcacgtcgacgtggttctgaacccgctgggc
gtgccctcgcgcatgaacgtcggccagatcttcgaaacccacctgggctgggcctgcgcc
ggtctcggcaagcagatcacggccctgctggaagactggcaggccggcggtcagaagcag
gcgctcgttgagcgtctgaccgagatctatggcccggacgaagaactgcccgacaccgaa
gagggtctggtggaactggcccgcaacctcggcaagggcgttccgatcgcgacccccgtg
ttcgacggtgcgcggatcggcgacatcgaggatcacctgcgcatggcgggcctcgatccg
tcgggccaatcgatcctgtacgacggccagaccggcgagcagttcaagcgtccggtcacg
gtcggctacatctacatgctgaagctgcaccacctggtcgacgacaagatccacgcccgc
tcgatcggtccgtactcgctcgtcacgcaacagccgctgggtggtaaggcccagttcggc
ggacagcgcttcggggaaatggaagtctgggctctggaagcctacggcgcggcctacacc
ctgcaggaaatgctgacggtgaagtccgacgacgtggccggccgcaccaaggtctacgag
tcgatcgtccgtggcgacgacacgttcgaagccggtatccccgaaagcttcaacgtgctg
gtcaaggaaatgcgctcgctcggcctgaacgtcgagctggagaacagctga
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integrated database retrieval system
