Chlamydia psittaci RD1: Cpsi_9031
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Entry
Cpsi_9031 CDS
T02153
Name
(GenBank) putative helicase
Organism
chr
Chlamydia psittaci RD1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SNF2_assoc
SWIM
DUF5364
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
CBY17410
LinkDB
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Position
complement(1051796..1055293)
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AA seq
1165 aa
AA seq
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MLNFRKLRRDFTANILQDGKELFDQGAVINAKILSMNGESVCIGAQVRGLYDNVYECEIE
VDRSKSDTIDSNCDCSYNYDCQHIVALLFYLERYFNEMVVAYSQEANLETNQEINEDVKK
ELQETFVAAANREEERKDRAHQKEILSEYIHAANVLSANPFFLPQEYLEKNSAELAVLFV
ASNDEVFRPNQHVEFQLVLRLPGRSKPFYISNIKTFLEGVLYQEPIILNGRHFFFTMQSF
NASDRKLIDLLIRYVRYANQPPEEKLLKSAYLTLTSLGVILAKMYEHQMADRGGCQSGEK
ESFSGIFCGNLEEPLYWSVTPAKMKFDLDFFDTPYKALLMTPLILVDDDTLQPEQAILLE
SNVPGIIHNNVYHHFAPQIRRAHLRSFSKLRDVTIPEALFGSFRENALPVFKEYAEVSNV
EVLNSFVTLPYVEDVRGECNISYLDGELEAKLYFIYDDLRVPAVPFSLQFDEIRAFIRED
GILARNLVEERKIIDEVFSGFIYDERDGAFHVKSEKKIVEFMTETIPNNQHRITFNCPET
LSDQFIYDETVFDLAFREGSEVNTYEAELKVNGYLKGISLDLLWDCISAKKRFLELPKKG
RHVKTRRGRASGSTKLPCILVLDLEKISPVIQIFNEIGFKVLDDFVEKCPLWSLTGISPE
LFKGLPVNFKMTKKLAEIQKQIRGEVDFKFQEIPQQIQATLRSYQTEGIHWLERLRKMHL
NGILADDMGLGKTLQAIIAITQSKLEKGKGCSLIVCPTSLVYNWKEEFRKFNPEFKTVII
DGVPSYRRRQLANLSDYDVAITSYNLLQKDIDVYKDFVFDYVVLDEAHHIKNRTTRNAKS
VKMIRSGHRLILTGTPIENSLEELWSLFDFLMPGLLSSYDRFVGKYIRTGNYMGNKTDNM
VALKKKVAPFILRRMKEDVLEDLPPVSEILYHCHLTDSQKELYHSYAASAKKELSRLVKQ
EGFDRIHIHVLATLTRLKQICCHPAIFAKDVPEPGDSAKYDLLMDLLSSLVETGHKTVLF
SQYTKMLSIIKKDLEARGVRFVYLDGSTKNRLEIVNQFNEDPGLLVFLISLKAGGTGLNL
VGADTVIHYDMWWNPAVENQATDRVHRIGQNRSVSSYKLVTLNTIEEKILTLQNRKKSLV
KKVINSDDEVVSKLTWEEVLELLQI
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgctcaattttcgcaaattacgaagggattttacagctaacattttgcaagatggcaag
gaactttttgaccaaggagctgtgattaatgcgaaaatcctgtctatgaatggagaatca
gtctgcataggagcgcaggttcgagggctatatgacaacgtatatgaatgtgaaatagaa
gttgatcgatcgaaatctgataccatagattctaactgtgactgttcttataactatgat
tgtcagcatatagtagcgctgctgttttatttagaaaggtatttcaatgaaatggtagtg
gcttattctcaagaagctaacttagagacgaatcaagagataaacgaagacgttaaaaaa
gaacttcaggaaacttttgtcgctgctgcaaatagagaagaagaaagaaaagaccgtgct
catcaaaaagaaatcttaagtgagtacattcatgcggctaatgtattaagcgcaaatcca
tttttccttcctcaggaatatctcgagaagaattctgcagagcttgccgttttatttgtt
gcttccaatgatgaagtattccgtccgaaccagcatgtagaatttcaattagttttacgt
cttcctggtcgttctaaaccgttttacatttcaaacattaagacatttcttgaaggagtg
ttgtatcaagagcctattatcttgaacgggcgtcacttctttttcacaatgcaatctttt
aatgcttccgatcgcaagcttatagatttgctgattcgttacgtgcgttatgctaaccaa
cctcctgaagagaaactgttgaaatcagcgtaccttacgttaacctctttaggtgtcatt
ttagcaaagatgtatgaacatcaaatggcggatcgtggaggatgtcaatctggagagaaa
gaaagtttctcaggaatattctgtgggaatcttgaggagcctttatattggtctgttact
ccagctaagatgaagtttgatttagactttttcgatactccatacaaagcattgttaatg
actccattgatccttgtggatgatgacacgcttcagccagagcaagcgattcttttggaa
tctaatgttcctggtattattcataacaatgtataccaccattttgctcctcagattcga
cgtgcgcatttgcgttctttctcgaagttgcgtgatgtgactataccagaagctttattt
ggttctttccgagaaaatgctcttcctgtgtttaaggaatatgcagaggtttctaatgtc
gaagttctgaattcatttgtcactcttccttatgttgaggatgttcgaggtgaatgcaac
atcagttacttggatggggagctagaggcaaagttgtatttcatctatgatgatctcagg
gttcctgctgttcctttctctttgcaatttgatgagatccgcgcgtttattcgtgaagat
gggattctagcaaggaatcttgttgaagagcgcaagataatagacgaggtcttttctggt
tttatctatgacgagcgagacggggcttttcatgtaaaaagtgaaaagaaaattgttgag
tttatgacggaaactattcctaataaccaacacaggatcacatttaattgtcctgaaacc
ctttctgatcagtttatttatgatgaaactgtctttgatcttgctttcagagaaggttct
gaagtcaatacttatgaagcagaactgaaagtaaacggttacttgaaaggaatcagccta
gacctactttgggattgcataagcgctaaaaaacgtttcttagagctaccgaagaaaggg
cgtcatgttaagacgcgcagaggtagagcttcaggttctacaaaacttccttgtattttg
gttttagacctagagaagatatctccagttattcagatctttaatgaaatcggttttaaa
gttctggatgattttgtagagaagtgtcctttatggagtttaacggggatttctccggag
cttttcaaaggtcttcctgttaactttaaaatgacgaaaaagttggcagaaatacaaaaa
caaattcgtggagaagttgattttaaattccaagagattcctcagcagatacaggcaaca
ttgcgtagttatcaaactgaagggattcattggttagaacgtcttagaaagatgcatctc
aatggtattcttgccgatgacatggggcttggaaagactttacaagcaattattgcgatt
acgcaaagtaagttagagaagggcaagggatgttcgttaattgtctgtccaacatctttg
gtatacaactggaaagaagagttccgtaaatttaatccagaatttaagactgtgattatt
gatggtgtcccttcatatagacgtagacagttggctaatttgtcggattatgatgtggcc
attacctcgtataacctattacaaaaggatatcgatgtatataaggattttgtctttgat
tatgtagttttagatgaagcccatcatattaagaaccgtacaacgcgtaatgcgaaatct
gtaaaaatgattcgttcggggcatagattaattctcacgggtactccgattgaaaattct
ttggaagagttgtggagtttattcgatttcttgatgcctggcttattaagcagttacgat
cgctttgttggtaaatacatccgtacgggcaactacatggggaataagaccgacaatatg
gtggctttgaagaagaaggtagcgccatttattcttcgtcgtatgaaagaagatgtattg
gaagatttgcctcctgtttcggagattttgtatcactgtcatcttacagattcgcagaaa
gaactctatcattcttacgcagcttcagctaagaaagagctttctcgtttggtgaaacaa
gaaggttttgatcgtattcatattcacgttcttgccacactgactcgtttaaaacagatc
tgttgtcaccctgcgatttttgcaaaagacgttcctgagccaggagattctgcaaagtat
gacttactgatggatcttctttcttctcttgtggagacaggacataaaacggttctcttt
agtcagtataccaagatgttgagtatcatcaaaaaggacttagaggctcgtggagttcgt
tttgtttatttggatggttccaccaagaacagattggaaatcgtgaaccagtttaacgag
gatcctggattattagtcttcttgatttctttaaaagcagggggaacagggttgaacctt
gttggtgcagatacagtaattcactatgatatgtggtggaatcctgctgtagaaaatcaa
gcgacggatcgtgtgcatcgtatagggcagaatcgttcggtgtcttcgtataagttagtt
acgttaaatacaatcgaagaaaaaattctaacgctgcaaaataggaaaaagagccttgta
aagaaagtgatcaactctgatgatgaagtcgtttccaagttgacttgggaagaagtacta
gaattgctacagatatga
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