Chromobacterium phragmitis IIBBL 274-1: DK843_08910
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Entry
DK843_08910 CDS
T05744
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chrb03036
]
DK843_08910 (xerD)
Chromosome and associated proteins [BR:
chrb03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
DK843_08910 (xerD)
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Paralog
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_integr_3
Motif
Other DBs
NCBI-ProteinID:
AXE34406
UniProt:
A0A344UGK8
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All DBs
Position
complement(1833344..1834231)
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AA seq
295 aa
AA seq
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MSSSKDSIDAFLDQLWLEDGLSQNTLAAYRRDLSKLAARLKEDGAALETAVPAELERALL
AGVASEKPATRARLTSALRRYYQHLSRNGARKDDPSAGLASPKQGQRLPKSLSEVDVEAL
LAAPDTSTPLGLRDRAMLETLYASGLRVSELVGMTLNQLNLLDGVVKTMGKGSKERLVPL
GEIAQDWLLRYLKEARPLLLAGLPCDAVFVTQRKAGMTRQMAWHLITQYAGRQGLAKVSP
HVLRHAFATHLVNHGADLRVVQLLLGHADISTTQIYTHVARERLKKLHARHHPRG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgtctaaagacagcatcgacgccttcctcgaccagctgtggctggaggatggg
ttgtcgcagaacacgctggcagcctaccgccgcgacttgtccaagctggcggccaggttg
aaagaggatggagcggctttggaaacggccgttccggctgagctggagagagcattgctg
gccggcgtggccagcgagaagccggccacccgcgcgcgcctgacctcggccctgcgccgc
tattaccagcatttgtcgcgcaacggggcgcgcaaggacgaccccagcgctgggctggcc
agccccaagcaggggcagcgcctgcccaagtccttgtccgaggtggatgtggaggcgctg
ctggccgcgccggacaccagcacgccgctgggcctgcgcgaccgggcgatgctggaaacg
ctgtacgccagcggcttgcgggtgtcggaattggtgggcatgacgctgaaccagctgaac
ctgctggacggcgtggtgaagaccatgggcaagggcagcaaggagcggctggtgccgctg
ggcgagatcgcccaggactggctgctgcgctacttgaaggaggcgcggccattgctgttg
gccgggctgccgtgcgacgcggtatttgtcacccagcgcaaagccgggatgacgcggcag
atggcttggcatctgatcacccagtacgctggccggcagggcctggccaaggtcagcccg
cacgtgctgcgccacgccttcgccacccatctggtcaatcatggcgcggacctgcgggta
gtgcagttgctgttgggccatgccgacatctccaccacccagatctacacccacgtcgcg
cgcgagcggctgaagaagctgcacgcgcgacaccatccgcgcggctga
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