Chromobacterium phragmitis IIBBL 274-1: DK843_12320
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Entry
DK843_12320 CDS
T05744
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb03030
DNA replication
chrb03430
Mismatch repair
chrb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DK843_12320
03430 Mismatch repair
DK843_12320
03440 Homologous recombination
DK843_12320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrb03032
]
DK843_12320
03400 DNA repair and recombination proteins [BR:
chrb03400
]
DK843_12320
Enzymes [BR:
chrb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DK843_12320
DNA replication proteins [BR:
chrb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DK843_12320
DNA repair and recombination proteins [BR:
chrb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DK843_12320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AXE35014
UniProt:
A0A344UIB6
LinkDB
All DBs
Position
complement(2562002..2563006)
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AA seq
334 aa
AA seq
DB search
MPSLSPDALSAALGKGLAPLYLVHGEEALLALEAADAVRRAAQAAGYQEREVLTVEAGFD
WSQLTDSMSSVSLFASLKLLEIRIPGGKPGVEGAEALQRLAAQPPQDTITLITLPKLEKA
QQQSKWFTALEKAAQVVEARPVGRAELPGWIARRLKAQGQQLGAEALAFFVDRVEGNLLA
ARQEVDKLALLYPKGELSLADLQAAVANVARFDVFQLSEAWLSGDTPRLTRMLDGLMAEG
EAPVLVLWSLAEDVRMLLKLRQGLKDGRQPRDMARELRLWGEKQKLAEPALRRIGPRKLM
AALSECARIDRQIKGVEPGEPWQTMRALAVGLAA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccctcagccctgacgcgctgagcgcggcgctgggcaaaggcctggcgccgctg
tacctggtgcatggcgaagaggcgctgctggcgctggaggcggccgacgccgtgcgccgc
gccgcgcaggcggccggctaccaggaacgtgaggtgctgacggtggaggccggtttcgac
tggtcgcagctcaccgactccatgtccagcgtgtcgctgttcgcctcgttgaagctgctg
gaaatccgcattcccggcggcaagccgggtgtcgagggcgcggaggcgctgcagcgcttg
gctgcccagccgccgcaggacaccattaccctgatcacgctgcccaagctggagaaagcg
cagcagcagagcaagtggttcaccgcgctggaaaaagcggcgcaagtggtggaggcgcgc
ccggtgggccgcgccgagctgccgggctggattgcccgccggctgaaggcccagggccag
cagttgggcgcggaggcgctggcgttcttcgtcgaccgggtggaaggcaatctgctggcc
gcgcgccaggaggtggacaagctggcgctgctctatcccaagggcgagctgagcctggcc
gatctgcaggcggcggtggccaatgtcgcccgtttcgacgtgttccagctgtccgaagcc
tggctgtccggcgacacgcccaggctgacacggatgctggacgggttgatggccgaaggc
gaggcgccggtgctggtgttgtggtcgctggcggaagacgtccgcatgctgctcaagctg
cggcagggcctgaaagatggccgccagccgcgcgacatggcgcgcgagctccggctatgg
ggcgagaagcagaagctggcggagccggcgctgcgccgcatcggcccgcgcaagctgatg
gcagccttgtctgagtgcgcgcgcattgatcgccagatcaagggcgtcgagccgggagag
ccttggcagaccatgcgggcgctggccgtcggccttgccgcctga
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