Chromobacterium phragmitis IIBBL 112-1: DK842_03855
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Entry
DK842_03855 CDS
T05549
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Pathway
chri00300
Lysine biosynthesis
chri00470
D-Amino acid metabolism
chri01100
Metabolic pathways
chri01110
Biosynthesis of secondary metabolites
chri01120
Microbial metabolism in diverse environments
chri01230
Biosynthesis of amino acids
Module
chri_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DK842_03855
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DK842_03855
Enzymes [BR:
chri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DK842_03855
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AXE29125
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All DBs
Position
772099..773328
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AA seq
409 aa
AA seq
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MHAFDNRQLADIARRHGTPLWVYDAGTIRQRIAELKAFDTIRYAQKANSNTHILRLMRAE
GVKVDAVSLGEIERALAAGYQGGGEEADIVFTADVLDRPTLARVVAERIPVNAGSIDMLR
QLGEAASGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHGDLDEALRTIRQFKLRLVGV
HMHIGSGVDYGHLEQVCGAMAALVEKLDCDIEAISAGGGLSIPYRDGDARIDTDHYFQLW
DAARRRIAAKLGHPVRLEIEPGRFLVAESGALLAEVRAVKNMGSRHFVLVDAGFNDLMRP
SLYGSYHHISLLDAEGDEKTGAVDTVVAGPLCESGDVFTQQEGGTVETRSLPPAQVGDLM
VFHDAGAYGATMSSNYNSRPLLAEVLVDGGEVRRIRRRQTMAELLALES
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcatgctttcgacaaccgccagctcgccgacatcgcccgccggcacggcaccccgctg
tgggtctacgacgccggcaccatccggcagcgcatcgccgagctgaaagccttcgacacc
atacgctacgcgcagaaggccaactccaacacccacatcctgcggctgatgcgcgccgag
ggcgtcaaggtggacgcggtatcgctgggcgagatcgaacgcgcgctggccgccggctat
caaggcggcggcgaagaggcggacatcgtgttcaccgccgacgtgctggatcgcccgacg
ctggccagggtggtcgccgaacgcataccagtcaacgccggctccatcgacatgctgcgc
cagttgggcgaagccgcgtccggccatccggtatggctgcgcgtcaaccctggcttcggc
catggccatagccagaaaaccaataccggcggcgagaacagcaagcacggcatctggcat
ggcgacctggacgaagcactgcggaccatccgccagttcaagctgcggctggtgggcgtg
cacatgcatatcggctccggcgtcgactacggccatctggagcaggtttgcggcgcgatg
gcggcgctggtggaaaagctggactgcgacatcgaggccatttccgccggcggcggcctg
tccattccctatcgcgacggcgacgcgcgcatcgacaccgatcactatttccagctgtgg
gacgccgctcgccggcgcatcgccgccaaactgggccacccggtgcggctggagatcgag
cccggccgcttcctggtggccgaatccggcgcgctgctggccgaagtgcgcgcggtgaag
aatatgggcagccgccatttcgtgctggtggacgccggcttcaacgacctgatgcggcca
tcgctctacggcagctatcatcacatctcgctgctggatgcggaaggcgatgaaaaaacc
ggcgccgtcgacaccgtggtggccggcccgctgtgcgaatccggcgacgtgttcacccag
caggaaggcggcaccgtggaaacccgctccttgccgccggcccaagtcggcgatctgatg
gtattccacgacgccggcgcttacggcgcgaccatgtcgtccaactacaacagcaggccg
ttgctggccgaggtgctggtggatggcggcgaggtccgccggatccgtcgccgccagacc
atggcggaattgctggccctggaatcctga
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