Capra hircus (goat): 102171898
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Entry
102171898 CDS
T02910
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
chx
Capra hircus (goat)
Pathway
chx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102171898 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102171898 (CLP1)
Enzymes [BR:
chx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
102171898 (CLP1)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
102171898 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
MMR_HSR1
AAA_18
AAA_16
TniB
AAA_22
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
102171898
NCBI-ProteinID:
XP_017914536
EnsemblRapid:
ENSCHIG00000023497
UniProt:
A0A452FTT7
LinkDB
All DBs
Position
15:complement(2381911..2390096)
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AA seq
425 aa
AA seq
DB search
MGEEASDDKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGAEESLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggaggccagtgatgacaagaagccaacaactaaatttgaactggagcgggag
acagagcttcgctttgaggtggaggcgtcgcagtcagttcagttggagctgctggctggc
atggcagaaatcttcggcacagagctgacccgaaacaagaagttcacctttgatgctggc
gccaaggtggctgtcttcacttggcacggctgttcgctgcagctcagtgggcgcaccgag
gtggcttacgtctccaaggacaccccaatgttgctttatctcaacacacatacggccttg
gagcagatgcggaggcaggccgagaaggaggaggagcggggcccccgggtgatggtcgtg
ggccccacggacgtgggcaagtccaccgtgtgccgtctgctgctcaactacgcggtgcgt
ctgggccgccgtcccacgtacgtggagctggatgtgggccagggctctgtgtccatcccc
ggcaccatgggggccctctacatcgagcggccggcggacgttgaggaggggttctccatc
caggccccgctggtgtaccacttcggctccaccacgcccggcaccaacatcaagctttat
aataagattacatctcgtttagccgatgtgttcaaccaaaggtgtgaagtgaaccgcagg
gcctcggtgagcggctgtgtcattaacacctgtggctgggtcaagggctctggttaccag
gccctggtccacgcagcctcagcctttgaggtggatgtcgtcgtggttctggatcaagaa
cggctgtacaacgagctgaagcgggacctgcctcacttcgtccgcacggtgctgctcccc
aagtcggggggtgtggtggagcgctccaaggacttccggcgggaatgccgggatgagcgc
atccgtgagtatttctacgggttccggggctgtttttatccccatgccttcaacgtcaaa
ttttcagatgtgaaaatctacaaagtcggggcacccaccatcccagactcctgcctgcct
ctgggcatgtctcaggaggacaatcagctcaagctggtgcccgtcacccccggccgagat
atggtacaccacctgctgagcgtcagcacagccgagggtgcggaggagagcctctcggag
accagcgtggcgggcttcattgtggtgaccagcgtggacctggagcaccaggtgttcacc
gtcctctcccccgccccccgcccgctgcccaagaacttcctgctcatcatggatatccgg
ttcatggatcttaagtag
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