KEGG   Capra hircus (goat): 102173499Help
Entry
102173499         CDS       T02910                                 

Gene name
LIG3
Definition
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
chx  Capra hircus (goat)
Pathway
chx03410  Base excision repair
Module
chx_M00296  BER complex
Brite
KEGG Orthology (KO) [BR:chx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102173499 (LIG3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chx03400]
    102173499 (LIG3)
Enzymes [BR:chx01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     102173499 (LIG3)
DNA repair and recombination proteins [BR:chx03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     102173499 (LIG3)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase Synaptonemal_3 mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID: 102173499
NCBI-ProteinID: XP_017919719
LinkDB All DBs
Position
19
AA seq 1003 aa AA seqDB search
MTLAFKILFPPTLRALGKKELCLFREQHHRPDIRHFGQWSETVLRGDHLLQRRKPVPSFR
ESNLRPRAACLVFLPGSHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIG
KVVPNPFSEAGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEENEKEQISQH
IADLSSKATSTPKKKAVVQAKLTATGQVASPVKGASFVTNSNPRKFSGFSAKPNNSGEAH
SSPTPKTPKTSLSSSKCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQDFLQKGSAGD
GFHGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCSADDMTRDLEQGDVSETIRVF
FEQSKSFPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIK
HDLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGQRRALSVQASL
MTPVQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK
VAHFKDFIPRAFPGGHSMILDSEVLLIDNRTGRPLPFGTLGVHKKAAFQDANVCLFVFDC
IYFNDVSLMDRPLCERRKLLYDNMVEIPNRIMFSEMKQVTKASDLVDMINRVIREGLEGL
VLKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCFD
PSSQKWCTVTKCAGGHDDATLARLQTELDMVKISKDPSKIPNWLKINKIYYPDFIVPDPK
KAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKERAA
FAITAGDEGSSAAGGSSGESEGTSGPAVPHKAPRASPKQPPASAKKAGGKPGGCTSRGGN
LPAAKPSPVRVGVKRKAPDVTPCQAKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAFDGDL
VQEFDVASATHVLGGRDRNPEAQQVSPEWIWACIRKRRLVAPC
NT seq 3012 nt NT seq  +upstreamnt  +downstreamnt
atgactttggcttttaagatcctcttcccaccaactctccgtgcactcgggaaaaaagaa
ctgtgcctattccgagaacaacatcaccggcctgacataagacactttggccagtggtca
gagacagttcttcgtggagaccacctcctccagagaagaaagcctgttccgtcctttcgg
gaaagcaacctgagaccacgtgccgcctgccttgttttcttgccagggtcgcatgtggga
ctctgcagtggtccctgtgaaatggcagaacaacgcttctgtgtggactacgccaagcgt
ggcaccgccggctgcaaaaaatgcaaggaaaagattgtcaagggagtatgccgaatcggc
aaagtggtgcccaatcccttttcagaggcggggggcgatatgaaagagtggtaccacatt
aaatgtatgtttgagaaactggagcgggcccgggccaccacaaaaaaaattgaggacctc
accgagctggaaggctgggaagagctggaagagaatgagaaagagcagataagtcagcac
attgcagatctatcttccaaggcaacaagcacaccaaagaagaaagctgttgtccaggct
aagttgacagccactggccaggtagcatctccagtgaaaggtgcctcatttgtcaccaat
tccaatccccgaaagttttctggcttttcagccaagcccaacaactctggggaagcccac
tccagcccaacccctaagacccctaagacaagtctgtcctcaagcaaatgtgacccgaaa
cacaaggattgtctgctgcgtgagtttcggaagttgtgtgccatggtggctgaaaatcct
agctacaacacgaaaacccagatcatccaggacttccttcagaaaggctcagcaggagat
ggtttccacggtgacgtgtacctaacagtgaagctgctgctgccgggtgtcattaagagt
gtttacaacttgaatgataagcagatcgtgaagcttttcagccgcatttttaactgcagc
gcggatgacatgacacgagacctggagcagggtgacgtgtcagagacaatcagagtcttc
tttgagcagagcaagtctttccctccagctgccaagagcctccttaccatccaggaggtg
gacgaattcctcctgcggctctccaagctcaccaaggaggatgagcagcaacaggccctg
caggatatcgcctccaggtgtacagccaacgaccttaagtgcatcatcaggctgatcaag
catgatctgaagatgaactcaggtgcaaaacacgtgttagatgccctagaccccaatgcc
tatgaagccttcaaagcctcacgcaacctgcaggatgtggtggagcgggtcctccgcaac
gagcaggaggtggagaaggagccaggccagagacgagctctgagtgtccaggcctctctg
atgaccccagtgcagcccatgctggctgaggcctgcaagtccatcgagtatgccatgaag
aagtgtccgaacggcatgttctctgagatcaagtacgacggggagcgagtccaggtgcat
aaaaagggggaccacttcagttacttcagccgcagtctcaagcccgtcctgccacacaag
gtggcccactttaaggacttcatcccccgggctttccctgggggccacagcatgatcttg
gactctgaggtgctcctgattgacaacaggacaggcagaccactgccctttgggactctg
ggagtgcacaagaaagctgccttccaggatgctaatgtctgcctgtttgtttttgattgt
atctacttcaatgatgtcagcttgatggataggcctctgtgtgagcggcggaagcttctt
tatgacaacatggtggaaattcccaaccggatcatgttctcagaaatgaagcaagtcaca
aaagcttccgacttggtggacatgatcaacagggtgatccgagaggggctggaagggctg
gtgctgaaggacgtgaagggtacatatgagcctggaaagcggcattggctgaaagtgaag
aaagactatttgaatgagggtgccatggccgacacagctgacctggtggtgcttggggcc
ttctacgggcaagggagcaaaggtggcatgatgtccatcttcctcatgggctgcttcgac
ccgagcagccagaagtggtgcaccgtcaccaagtgtgcaggaggccacgacgacgcgacg
ctcgcccgcctgcagaccgaactggacatggtgaaaatcagcaaggatcccagcaagata
cccaactggctgaaaatcaataagatctactaccctgacttcatcgttccagacccaaag
aaagctgccgtgtgggagatcacaggggctgaattctcaaaatctgaggctcacacagcc
gatgggatctccatccgattccctcgctgcacccgaatccgtgatgataaggactggaag
tctgccacgaacctcccccaactcaaggagctgtaccaactgtccaaggagcgggcggcc
ttcgccataacggccggggatgaggggagctccgccgcaggaggcagcagcggggaaagc
gagggcacctcagggccggctgtgcctcacaaggccccgagagcctcccccaagcagcct
cccgccagcgccaagaaggctgggggcaagccgggcggctgcaccagcagaggcggcaac
ctaccagctgcaaagccctcccctgtgagagtgggggtgaagcggaaggctcctgatgtg
accccgtgccaagccaaggtgctgctggacatcttcactggagtgcggctctacctgcca
ccctccacgccagactttagccgcctcagacgctactttgtggcattcgatggggacctg
gtgcaggaatttgatgtggcctcagccacacacgtgctgggtggcagggacaggaacccc
gaggcccagcaggtctccccggagtggatctgggcatgtatccggaaacggaggctggtg
gctccttgctag

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