Capra hircus (goat): 102173973
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Entry
102173973 CDS
T02910
Gene name
PML
Definition
(RefSeq) promyelocytic leukemia
KO
K10054
probable transcription factor PML
Organism
chx
Capra hircus (goat)
Pathway
chx04120
Ubiquitin mediated proteolysis
chx04144
Endocytosis
chx05164
Influenza A
chx05168
Herpes simplex virus 1 infection
chx05200
Pathways in cancer
chx05202
Transcriptional misregulation in cancer
chx05221
Acute myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102173973 (PML)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102173973 (PML)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102173973 (PML)
05202 Transcriptional misregulation in cancer
102173973 (PML)
09162 Cancer: specific types
05221 Acute myeloid leukemia
102173973 (PML)
09172 Infectious disease: viral
05164 Influenza A
102173973 (PML)
05168 Herpes simplex virus 1 infection
102173973 (PML)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
chx04121
]
102173973 (PML)
Ubiquitin system [BR:
chx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102173973 (PML)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3583
zf-B_box
zf-RING_5
zf-C3HC4
Prok-RING_4
APG17
OmpH
Motif
Other DBs
NCBI-GeneID:
102173973
NCBI-ProteinID:
XP_005695206
UniProt:
A0A452DYU0
LinkDB
All DBs
Position
21
AA seq
868 aa
AA seq
DB search
MQQDPEPAGSPGPQQDPALPHSPSMPPPESLSEGHQSSHSDSPTEQATEEEFQFLRCQGC
RAEAKCPKLLPCLHTLCSGCLEESGIQCPVCQAPWPSGAGAQALDNVFFESLQRRLSVYQ
QIAREQAFCTRCKELAHYWCFECEQLICAKCFEAHQWFLKHEARPLAELRSQSVREFLDG
TRKSNNIFCSNPNHRSPMLTSIYCRGCSKPLCCSCALLDRDHGELKCDISMEIQQRQDEL
DTMTQDLQEQDRSFGAAQAQMRSAISQLGRVRADTEEFIRERVREVVAHVLEQERELLEG
VGARYQRDYEEIAGQLGRLDAVLQRIRMGSVLVQRMKLYASDQEVLDMHDFLRKALHQLR
QEEPQSLRATVHTDSFNEFRVRLQGLVSCITQGRDAALSRRASPEAASTPRDTCGPDPPE
EVPRDQMQAAGLAVVQPVPGAHPVPVYAFSIQDPSRREEGTHTQKRKACQTECPRKVIKM
ESEEGEESRLAQSSPEQPRPSTSRAVSPPHLDGPSSPKSPIIRDELPLPESNHQTGDPAE
TEERVVVISSSEDSDAENPDSRELADNSSESSDLQLEGPSSLAVLDDGLSNSLVEDKPLV
FFDLKIDNETQKISQLAAVNQESQFRALIQPEALNVYSKAVSLEVGLQHFLYFLASMHQP
ILACYKLWGPSLPSFFQALEEMNMLGKFQKSISGFLATLPLIRECVPGASSFKLKSLAKT
YLARNMSERSALAAVLAMRDLCRLLEVSPGPQLAPHIHPFSSLQCFSSLQPLVQAAILPR
AEARLLALHKVTFIELLTAHHHDPQGGLKKYNRFLSLQTPTSSQPALDLQSLGTYFEGLL
GEPASAGAGGVAAPPAGHSLAERATQQT
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggatccggagcctgccggatctccggggccccagcaggaccccgcactgccc
cactcccccagcatgcctcccccggagtcactctccgaaggccaccagtccagccacagc
gacagccccacagagcaagccacggaggaagagttccagttcttgcgctgccagggctgc
cgggcagaagctaagtgccccaagctgctgccttgtctgcacacgctgtgctcaggatgc
ctggaggagtccggcatacagtgccccgtctgccaggctccctggccctcaggtgccggc
gcgcaggccctggacaacgtcttcttcgagagcctgcagcggcggctgtcggtgtaccag
cagatcgcacgcgagcaggcgttttgcacccgctgcaaagagttggcccactactggtgc
ttcgagtgtgagcagctcatctgcgccaagtgcttcgaggcgcaccagtggttcctcaag
cacgaggcccggccgctggcggagctccgcagccagtccgtgcgggagtttctggacggc
acccgcaagtccaacaacatcttctgctccaaccccaaccaccgcagccctatgctgacc
agcatctactgccgaggctgctccaagcccttgtgctgctcgtgcgctctcctggatagg
gaccatggcgagctcaagtgcgacatcagcatggagatccagcagcggcaggatgagctg
gacaccatgacccaggacctgcaggagcaggaccgcagcttcggggcagcgcaggcgcag
atgcgctctgccatcagccagctgggccgcgtacgcgccgacactgaggagttcatccgt
gagcgcgtgcgcgaggtggtagcgcacgtgctagagcaggagcgtgagctgctggaaggc
gtgggtgcgcggtaccagcgcgactatgaagagatagcgggccagctgggccggctggat
gctgtactgcagcggatccgtatgggcagcgtgctggtgcagaggatgaaactatacgcc
tcggatcaggaggtgctggacatgcatgacttcctgcgcaaggcactccaccagctgcgc
caagaggagccccagagtctgcgagccacggtgcacacagacagcttcaacgaattcagg
gtgcgcctgcagggcctcgtctcttgcatcacccagggtagagatgcagctctatccagg
agagccagcccagaagctgccagcactcccagagacacttgtggtcctgacccgccagag
gaggtgccgagggaccagatgcaagccgcgggattggccgtggtacagccggtgccaggg
gcacaccctgtgccagtgtacgccttctccatccaagacccctcccgcagagaagagggc
acccacacgcagaagaggaaggcctgccagaccgagtgcccccggaaggtcatcaagatg
gagtctgaggagggggaagagtctaggttggctcagagctcccctgagcagcccaggccc
agcacctccagggcagtctcgccaccccacctggatgggccctccagccccaagagcccc
atcataagagatgagctccccttgcctgagagcaaccatcaaaccggcgaccctgcagag
acagaggagcgcgtcgtggtgatcagcagctcggaagactcagatgctgaaaacccggac
tcccgagagctggccgacaacagcagcgagtccagtgacctccagctggagggccccagc
tccctcgcagtcctggacgacggcctctccaactccctggtggaagacaagcccctggtt
ttctttgacctcaagattgacaatgaaacccagaagattagccagctggcagccgtgaac
caggaaagccagttccgcgcgctcatccagcccgaggcgctcaacgtgtactccaaggct
gtctccctagaggtgggactgcagcacttcctgtacttcctggcgagcatgcaccagccc
atcctggcctgctataagctgtggggacccagtctccccagcttcttccaggccctggag
gagatgaacatgctggggaagttccagaagtccatctcgggcttcctggccaccctgccc
ctcatccgggagtgcgtgccgggggccagcagcttcaaactcaagagcctggccaagacc
tacctggcaagaaacatgagcgaacgcagcgccctcgcggccgtgctggccatgcgcgac
ctgtgccgactcctcgaggtgtcccccggcccccagctggccccgcacatccaccccttc
agcagcctgcagtgcttctcatccctgcagcccctggtgcaggcggccatcctgccccgg
gccgaggcccgcttgctggccctccacaaggtcaccttcatagagctgctgaccgcacac
caccatgacccccagggcggcctgaagaagtacaaccgcttcctgagcctccagactccc
acgtcgtcccagcctgcactcgacctgcagtctctgggcacctacttcgaaggcctgctg
ggggagccggcctcggcaggggcaggaggcgtcgctgcccctccggctggccacagcttg
gcagaaagggctacgcagcagacctga
Capra hircus (goat): 102188350
Help
Entry
102188350 CDS
T02910
Gene name
RARA
Definition
(RefSeq) retinoic acid receptor alpha
KO
K08527
retinoic acid receptor alpha
Organism
chx
Capra hircus (goat)
Pathway
chx04659
Th17 cell differentiation
chx04915
Estrogen signaling pathway
chx05200
Pathways in cancer
chx05202
Transcriptional misregulation in cancer
chx05221
Acute myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
102188350 (RARA)
09152 Endocrine system
04915 Estrogen signaling pathway
102188350 (RARA)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102188350 (RARA)
05202 Transcriptional misregulation in cancer
102188350 (RARA)
09162 Cancer: specific types
05221 Acute myeloid leukemia
102188350 (RARA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chx03000
]
102188350 (RARA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
chx03310
]
102188350 (RARA)
Transcription factors [BR:
chx03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102188350 (RARA)
Nuclear receptors [BR:
chx03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
102188350 (RARA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
102188350
NCBI-ProteinID:
XP_017920520
UniProt:
A0A452EMU9
LinkDB
All DBs
Position
19
AA seq
462 aa
AA seq
DB search
MASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPAT
IETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEVPKPECSESYTL
TPEVGELIEKVRKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALK
VYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
DTLSGQAGSGGRDGGGLAAPPGSCSPSLSPSSNRSSPATHSP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaacagcagctcctgcccaacacctgggggagggcacctcaatgggtacccg
gtgcccccctacgccttcttcttcccccccatgctgggtggactctcccccccaggcgct
ctgaccactctccagcaccagcttccagtgagcggctatagcacgccatccccagccacc
atcgagacccagagcagcagttccgaagagatcgtgcccagccccccctcgccgcctcct
ctcccccgcatctacaagccttgctttgtctgtcaagacaaatcctcaggctaccactat
ggggtcagcgcctgtgagggttgcaagggcttcttccgccgcagcatccagaagaacatg
gtgtacacgtgtcaccgggacaagaactgcatcatcaacaaggtgacccggaaccgttgc
cagtactgtcggctgcagaagtgcttcgaagtgggcatgtccaaggagtccgtgagaaat
gaccggaacaagaagaagaaggaggtgcccaagcccgagtgctccgagagctacacgttg
acaccagaggtgggggagctcatcgagaaggtgcgcaaagcgcatcaggagaccttccct
gcgctctgccaactgggcaaatacactacgaacaacagctcagaacagcgtgtctccctg
gacattgacctctgggacaagttcagtgaactctccaccaagtgcatcattaagactgtg
gagttcgccaagcaactgcccggcttcaccaccctcaccattgcggaccagatcaccctc
ctcaaggctgcctgcctggacatcctgatcctgcggatctgcacgcggtacacgcccgag
caggacacgatgaccttctcggacgggctgaccctgaaccggacccagatgcacaacgcc
ggctttggcccactcacggacctggtcttcgccttcgccaaccagctgctgcccctggag
atggatgacgctgagactgggttgctcagcgccatctgcctcatctgtggagaccggcag
gacctggagcagccagacagggtggacatgctgcaggagccgctgcttgaggcactgaag
gtctatgtgcggaaacggaggcccagccgcccacacatgttccccaagatgctgatgaag
atcacagacctccggagcatcagtgctaagggggctgagcgagtgatcacgctgaagatg
gagattccgggctccatgccacctctcatccaggaaatgctggagaactcagagggtctg
gacactctgagcggacaagcggggagtggggggcgggatgggggcggcctggctgccccg
cccggcagctgtagccccagcctcagccccagctcaaacagaagcagcccggccacccac
tccccgtga
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integrated database retrieval system