Capra hircus (goat): 102179446
Help
Entry
102179446 CDS
T02910
Symbol
CFTR
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
chx
Capra hircus (goat)
Pathway
chx02010
ABC transporters
chx04024
cAMP signaling pathway
chx04152
AMPK signaling pathway
chx04530
Tight junction
chx04971
Gastric acid secretion
chx04972
Pancreatic secretion
chx04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102179446 (CFTR)
09132 Signal transduction
04024 cAMP signaling pathway
102179446 (CFTR)
04152 AMPK signaling pathway
102179446 (CFTR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102179446 (CFTR)
09150 Organismal Systems
09154 Digestive system
04971 Gastric acid secretion
102179446 (CFTR)
04972 Pancreatic secretion
102179446 (CFTR)
04976 Bile secretion
102179446 (CFTR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chx02000
]
102179446 (CFTR)
Enzymes [BR:
chx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
102179446 (CFTR)
Transporters [BR:
chx02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
102179446 (CFTR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
CFTR_R
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_16
T2SSE
DO-GTPase2
DUF87
RsgA_GTPase
MeaB
nSTAND3
Zeta_toxin
NTPase_1
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
102179446
NCBI-ProteinID:
XP_013818759
EnsemblRapid:
ENSCHIG00000017768
LinkDB
All DBs
Position
4:69349724..69530890
Genome browser
AA seq
1520 aa
AA seq
DB search
MQRSPLEKASVVSKLFFRKFVNYKLVSNKYLSLALIFPLFMLGNLEILSYLFLLYFSWTR
PILKKGYRQRLELSDIYHISSSDSADNLSEKLEREWDRELASKKNPKLINALRRCFFWRF
MFYGIILYLGEVTKAVQPLLLGRIIASYDPDNKVERSIAIYLGIGLCLLFIVRTLLLHPA
IFGLHHIGMQMRIAMFSLIYKKTLKLSSRVLDKISIGQLVSLLSNNLNKFDEGLALAHFV
WIAPLQVTLLMGLLWDLLQAFTFCGLAFLVVLALLQAGLGKMMMKYRDQRAGKINERLVI
TSEMIENIQSVKAYCWEEAMEKIIENLRQTELKLTRKAAYVRYLNSSAFFFSGFFVVFLS
VLPYALLNGIILRKIFTTISFCIVLRMAVTRQFPWAVQTWYDSLGAINKIQDFLQKQEYK
TLEYNLTTTDVVMENVTAFWEEGFSKLFEKAKENNNNRKISNGDTSLFFSNLLLGTPVLK
DISFKIERGQLLAVAGSTGAGKTSLLMMIMGELEPSEGKIKHSGRISFCSQYSWIMPGTI
KDNIIFGVSYDEYRYRSVIKACQLEEDISKFSEKDNIVLGEGGITLSGGQRARISLARAV
YKDADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEG
SIYFYGTFSELQNQRPDFSSKLMGCDTFDQFTAERRNSIITETLRRFSLEGDTSVSWNET
KKPSFKQTGEFGEKRKNSILNSINSIRKFSVVQKPSLQMNGIDGASDEPLERRLSLVPHS
EPGEGILPRSNAVNSGPTLLGGRRQSVLNLMTCSSVNQGQSIHRKTATSTRKMSLAPQAS
LAEIDIYSRRLSQDTGLEISEEINEEDLRDCFFDDVENIPAVTTWNTYLRYVTVHKSLMF
VLIWCLVVFLVEVAASLVVLCLFPKILFQDKGNSTKNANNSYAVIITSTSSYYIFYIYVG
VADTLLALGLFRGLPLVHTLITVSKTLHHKMLQSVLQAPMSTLNTLKTGGILNRFSKDIA
VLDDLLPLTIFDFIQLLLIVIGAVVVVSVLQPYIFLATVPVIAAFILLRAYFLHTSQQLK
QLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQM
RIEMIFVIFFIAVTFISILTTGEGEGRVGIILTLAMNIMGTLQWAVNSSIDVDSLMRSVS
RVFKFIDMPTEDGKPNNSFRPSKDSQPSKVMIIENQHVKKDDIWPSGGQMTVKDLTAKYI
DGGNAILENISFSISPGQRVGLLGRTGSGKSTLLLAFLRLLNTKGEIQIDGVSWDSITLQ
QWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLV
DGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQAFADCTVILS
EHRIEAMLECQRFLVIEENKVRQYDSIQRMLSEKSLFRQAISPADRLKLLPHRNSSRQRS
RANIAALKEETEEEVQETKL
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggtcgcctctggaaaaggccagcgtcgtctccaaactttttttcaggaaattt
gtgaattataaacttgttagtaacaaatacttaagtttggcccttattttccccctcttc
atgcttggaaacttagaaatcttgtcatatctgtttctcctctattttagctggaccaga
ccaattttgaagaaaggatacagacagcgcttggaattgtcagatatataccatatctct
tcttctgattctgctgacaatctatctgaaaaattggaaagagaatgggacagagaactg
gcttcaaagaaaaatcccaaactcattaatgcccttcgacgatgctttttctggagattt
atgttctatggaatcatattatatttaggggaagtcaccaaagcagtccaacctctctta
ctgggaagaatcatagcttcctatgacccagataacaaggtggaacgctccattgccatt
tacttaggcataggcctatgccttctctttatcgtgaggacgctgctcctgcacccagcc
atttttggtctccatcacattggaatgcagatgagaatagctatgtttagtttgatttat
aagaagactttgaagctatcaagccgtgttctggataaaataagtattggacaacttgtt
agtctcctttccaataacctgaacaaatttgatgaaggacttgcactggcacattttgtg
tggattgctcctctgcaagtgacgctgctgatggggctgctctgggacttgttgcaggcc
ttcactttctgtgggcttgctttcctcgtagtcctcgcccttcttcaagccggattaggg
aaaatgatgatgaagtacagagatcagagagctggaaagatcaatgaaagactggtgata
acgtcagaaatgattgaaaatatccaatcagttaaggcatactgctgggaagaagcaatg
gaaaaaatcattgaaaacctaagacaaacagaactgaaacttacccggaaggcagcctat
gtgagatacctcaatagctcagccttcttcttctcagggttctttgtggtatttttatct
gtgcttccttatgcactgctcaatggaatcatccttcgaaaaatattcacaaccatctca
ttctgcatcgttttgcgcatggcagttactcggcagttcccctgggcagtacaaacttgg
tatgattctcttggagcaataaacaaaatacaggatttcttacaaaagcaagaatataag
acattggaatataacttaacaactacagatgtagtgatggagaatgtaacagccttctgg
gaggagggatttagtaaattatttgagaaagcaaaagaaaataataacaatagaaaaatt
tctaatggtgataccagcctcttcttcagtaacttactcctcggtactcctgtcctgaaa
gatatcagtttcaagatagaaagaggacagttgttggcagttgctggatctacgggagca
ggcaagacttcacttctcatgatgattatgggagaattggaaccttcagagggtaaaatt
aagcacagtggaagaatttcattctgctctcagtattcctggatcatgcctggaaccatt
aaagataacatcatctttggcgtttcctatgatgaatatagatataggagtgtcatcaaa
gcatgccaactagaagaggacatctccaagttttcagagaaagacaacatagttcttgga
gaaggtggaatcacactgagtggaggtcagcgagcaagaatttctttagcaagagcagta
tacaaagatgctgatttgtacctgttagactccccttttggatatctagatgttttaaca
gagaaagaaatatttgaaagctgtgtctgtaaattgatggctaacaaaactaggattttg
gtcacttctaaaatggagcacttaaagaaagctgacaaaatattaattttacacgaaggt
agcatctatttctatgggacattttctgaattacaaaatcagcggcctgacttcagctcg
aagctcatgggatgtgacactttcgatcagtttactgcagaacgaagaaattcaatcata
accgagactttacggcgtttctcattagaaggagatacttctgtgtcctggaatgaaaca
aaaaagccttcttttaaacagactggagagtttggtgaaaaaaggaagaactccattctc
aattcaatcaactctataaggaaattttcagttgtacaaaagccttcattacaaatgaat
ggtatcgatggagcttctgatgagcctttagagagaagactatccttagttccccattct
gaacctggagaggggatcctgcctcggagcaatgcagtcaacagtggccccacacttctg
ggagggaggaggcagtcagttctgaaccttatgacctgctcctcagtgaaccaaggtcag
agcattcatcgaaagacagcgacatccacacgaaaaatgtcactggctcctcaggcaagc
ttagccgaaatagatatatattcaagacggttatctcaagatactggcttggaaataagt
gaagaaattaatgaagaagatttaagggattgcttttttgatgatgtggagaacatacca
gcagtgactacctggaacacataccttcgatatgttactgtccacaagagcttaatgttt
gtgctaatttggtgcttagttgtgtttctggttgaggtggctgcttctttggttgtgttg
tgcctgtttccgaaaatactttttcaagacaaaggaaatagtactaagaatgcaaataac
agttatgcagtgatcatcaccagcaccagctcgtattatattttttacatttatgtggga
gtagctgacactttgcttgctctaggactcttcagaggtttaccactggtgcatactcta
atcacagtgtcaaaaactttacaccacaaaatgctacagtctgttcttcaagcccctatg
tcaaccctcaacacgttgaaaacaggtggaattcttaatagattctccaaagatatagca
gttttggatgatcttctgcctcttaccatatttgacttcattcagttgttattaattgtg
attggagctgtggtggtcgtctccgttttacaaccctacatcttcctagctacagtgcca
gtgatagcggcttttattctcttgagagcctacttcctccacacctcccagcaactcaag
cagctggaatctgaaggcaggagtccaattttcactcatcttgttacaagcttaaaagga
ctatggacacttcgtgcctttggacggcagccttactttgaaactttattccacaaagct
ctgaatttacatactgccaactggtttttgtatctgtcaacactgcgctggttccaaatg
agaatagaaatgatttttgtcattttcttcattgctgttaccttcatttccattttaaca
acaggtgaaggagaaggaagagttgggattattctaactttagccatgaatatcatgggt
acattgcagtgggctgtaaactctagcatagatgtggatagcttgatgcgatctgtgagc
cgagtctttaagtttattgatatgccaacagaagatggtaaacctaacaattcattcaga
ccatccaaagatagtcaaccctcaaaagttatgatcatcgagaatcaacatgtgaagaaa
gatgacatctggccctcagggggccaaatgactgtcaaagacctcacagcaaagtacata
gatggagggaacgccatactagagaacatatccttctcaataagtcccggccagagggtg
ggcctcttgggaagaactggatcagggaagagcactttgttactggcttttttgagactg
ctgaataccaaaggagaaatccaaatagatggtgtgtcttgggattcaattactttgcaa
caatggaggaaggcctttggagtcataccacagaaagtattcatcttttctggaacattt
agaaaaaacttggatccctatgaacagtggagtgatcaagaaatatggaaagttgcagat
gaggtcggactcagatctgtgatagagcagtttcctgggaagcttgattttgtccttgtg
gatgggggttgtgttctaagccatggccacaagcagttgatgtgcttggccagatctgtt
ctcagtaaagcaaagatcttgctgcttgatgaacccagtgctcatttggatccaataaca
taccagatcattcgaagaaccctaaaacaagcatttgctgattgcacagtaatcctctct
gaacacaggatagaagcaatgttggaatgtcaacgatttttggtcatagaggagaacaag
gtgcggcaatatgattccatccagaggatgctgagcgagaagagcctcttccggcaggcc
atcagccccgcagaccggctgaagctcttgccccaccggaactcgagcaggcagaggtct
cgggccaacatcgctgctctgaaggaggagacagaggaagaggtgcaggaaacaaagctg
tag
DBGET
integrated database retrieval system
