Capra hircus (goat): 102179846
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Entry
102179846 CDS
T02910
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain isoform X1
KO
K24355
collagen type XXIII alpha
Organism
chx
Capra hircus (goat)
Pathway
chx04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102179846 (COL23A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
chx00536
]
102179846 (COL23A1)
Glycosaminoglycan binding proteins [BR:
chx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102179846 (COL23A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102179846
NCBI-ProteinID:
XP_017906054
EnsemblRapid:
ENSCHIG00000031551
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All DBs
Position
7:70918108..71305099
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AA seq
541 aa
AA seq
DB search
MSPGRRACEDERNGDPAGGGGGPVSPATGARAWAVSALCLLLSASSAVACLLLGVQAAAL
QGRVAALEEERELLWRAGTPDALAAWAEPRLERLLREKLEGPVKLRTVREAPTDCVCPPG
PPGRRGKPGRRGDPGPPGQSGRDGYPGPLGLDGKPGLPGPKGEKGAPGDFGPQGNPGQDG
AAGPPGPPGPPGARGPPGDTGKDGPRGAPGPVGPKGEAGQDGATGPSGPPGPKGDDGIPG
QPGLSGPPGPKGEPGHPGTDGATGQRGPPGLKGEQGDTVVIDYDGRILDALKGPPGPQGP
PGPPGIPGAKGELGLPGAPGIDGEKGPKGQKGDPGEAGPTGPKGEAGEMGLSGLPGANGP
KGEKGESASDKLQESLAQIIAEPGPPGPPGPPGPMGLQGMQGPKGLDGAKGEKGSSGERG
PSGLPGPAGPPGLIGLPGTKGEKGRPGEPGLDGFPGPRGEKGDRSERGEKVGKGDRGVPG
RKGMKGQKGEPGPPGLDQPCPVENLRCRGRRGAPGSRGLARAGGPCPAGPDGLPVPGCWH
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagtccaggccggcgcgcctgcgaggacgagcggaacggagacccggctggcggcggc
ggcggaccggtgagccccgcgactggagcgcgggcctgggcggtgagcgcgctgtgcctg
ctgctctccgcgagctcggcggtcgcctgcctgctgctgggcgtccaggcagccgcgctg
cagggccgggtggcggccctcgaggaagagcgggagctgctgtggcgcgcggggactccc
gacgccttggccgcctgggccgagccgcggctggagcgcctgctgcgtgagaagttggag
ggaccagtcaagctccggacagttcgagaagcaccgacagactgtgtctgccccccaggc
ccccctggacggcgtggcaagcccggaagaagaggtgatcccggtcctcctgggcaatcg
ggacgagatggctacccggggccactgggtctggatggaaagcctggacttccaggcccc
aaaggggaaaagggtgcaccaggagactttggcccccagggaaatccagggcaagatgga
gctgctgggcctccagggcccccaggaccccctggggcccggggccctcctggcgacacc
gggaaagatggccccaggggagcaccaggcccagtgggtcccaaaggagaagctggacaa
gatggtgcaacgggcccaagtggacccccagggcccaagggggatgatgggataccaggc
caaccagggctctctggacccccagggcccaagggggagcccggccacccaggcactgat
ggagccacggggcagcggggtcccccaggcctcaagggtgaacaaggagacacagtggta
attgactacgatggcagaatcttggatgcccttaagggtcctcctgggccacaggggccc
ccagggccaccagggatccccggagccaagggcgaactcggattgcctggtgctcctgga
atcgacggagagaagggtcccaaaggacagaaaggagacccaggagaagccggaccaaca
ggacccaaaggggaagcaggagagatgggcttgtcaggcctcccgggtgccaacggcccc
aaaggagagaagggagagtcggcatctgacaagctacaggagagcctggcccagatcata
gcagaaccagggcccccaggccctcctggtcccccaggccccatgggccttcaggggatg
cagggtcccaagggcttggatggagcaaagggagagaagggctcgtcgggtgagagagga
cccagcggcctgcctgggccagctggcccaccaggccttattgggctgccaggaaccaaa
ggagagaagggcagacccggggagccaggactagatggtttccctggacctcgaggagaa
aaaggagaccggagcgagcgtggagagaaggtgggaaagggggatcgcggtgtcccgggt
cggaaaggaatgaaaggccagaagggcgagccgggacccccaggcctggaccagccgtgt
cctgtggagaatcttagatgcagaggcaggcgaggggcgccaggttccaggggcctggcc
agggccggtggaccctgccctgcgggccccgatggactgcctgtgcctggctgctggcat
aagtga
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