KEGG   Capra hircus (goat): 102180982Help
Entry
102180982         CDS       T02910                                 

Gene name
SETDB1
Definition
(RefSeq) SET domain bifurcated 1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
chx  Capra hircus (goat)
Pathway
chx00310  Lysine degradation
chx04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:chx00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    102180982 (SETDB1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    102180982 (SETDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:chx03036]
    102180982 (SETDB1)
Enzymes [BR:chx01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     102180982 (SETDB1)
Chromosome and associated proteins [BR:chx03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     102180982 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102180982 (SETDB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET Pre-SET MBD DUF4537 Chromo
Motif
Other DBs
NCBI-GeneID: 102180982
NCBI-ProteinID: XP_005677701
LinkDB All DBs
Position
3
AA seq 1287 aa AA seqDB search
MSSLPGCIGLAAATAAVESEEIAELQQSVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGNRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMPGELSKDGDLVVSMRILGKKRTKTWHKGTLIAIQTVGSGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPTEPPQPTAPPAPPAPALSPQAGDSESLEGQLA
QSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENAPGGKPGINQTYRSPLGSTTSAPAPPA
PPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSEQYRGKNPLLVPL
LYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLDPYV
LVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGPE
FLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYECNKR
CKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADK
EGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPEESNDD
SSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEMSSKDSRPPDLGPPHIPVPPSIP
VGGCNPPSSEETSKNKVASWLSCNSISEGGFADSDSHSSFKTSEGGEGRTGGGRGEAEKA
STSGLGFKDEGDIKQAKKEDPDDRNRMSIVTESSRNYGYNPSPVKPEGLRRPPSKTSMHQ
SRRLVASAQPNPDDILTLSSSTESEGESGTSRKPTAGQTSATAMDSDDIQTISSGSEGDD
FEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPVRKNTRQFYDGE
ESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWD
YNYEVGSVEGKELLCCCGAIECRGRLL
NT seq 3864 nt NT seq  +upstreamnt  +downstreamnt
atgtcctccctccctgggtgcattggtttggcagcagcaacagcagcagtggagtctgaa
gaaattgcagagctgcaacagtccgtggttgaggagctgggtatctcaatggaggagctt
cgacagttcattgatgaagaactggaaaagatggactgtgtacagcagcgcaagaagcaa
ctagcagagttggagacttgggtaatacagaaggaatctgaggtggcccatgttgaccaa
ctctttgatgatgcatccagggcagtgactaactgtgagtctttggtgaaggacttttat
tccaaactgggactacagtaccgggacagcagctctgaagatgaagcttcccggcctaca
gaaataattgagattcctgatgaagacgatgatgtcctcagtattgattcaggtgatgct
gggaacagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaaatcg
gctcaagatgtccagaagttcatggatgctgtcaacaagaagagtagttcccaggatctt
cacaaaggaacgttgagccagatgcctggagaactgagcaaagatggtgacttggtcgtc
agcatgcgcatccttggcaaaaagagaactaagacgtggcacaaaggcacccttattgcc
atccagacggttgggtcaggaaagaagtacaaggtgaaatttgacaacaaaggaaagagt
cttctgtcaggaaaccacattgcctacgattaccaccctcctgctgacaagttgtatgtg
ggcagtcgagtagtggccaaatacaaagatgggaatcaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcatcttctttgatgatggc
tatgcttcctatgttacacagtctgaactatatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatctcctgccgagacttcatagaagagtatatcaccgcttac
cccaaccgccccatggtgttgctcaagagtggccagctgatcaagactgagtgggaaggc
acgtggtggaagtcccgagtcgaggaggtggacggcagcctagtcaggatcctctttctg
gatgacaaaagatgtgaatggatctatcgaggctctacacgactggagcccatgttcagc
atgaagacatcatccgcctctgcactagagaagaagcaagggggacagctcagaacacgt
ccaaatatgggtgctgtgagaagcaaaggtcccgtggtccagtacactcaggatctaaca
agtactggaacccagttcaagcctacggaacccccacagccgacagccccacctgcccca
cctgctccagctctgtccccccaggcaggtgacagtgaaagcttggaaggccagcttgcc
caatctcggaagcaggtagccaaaaaaagcacatctttccggccaggatctgtgggctct
ggtcattcctcccctacatcccctgcactcagtgaaaatgcccctggtgggaaacctggg
atcaatcagacatataggtcacctttaggctccacaacctctgccccagctcccccagct
cccccagctcccccagccttccatggcatgctggagcgggcccctgcagagccctcctac
cgtgcccccatggagaagcttttctacttacctcatgtctgcagctatacttgtctgtct
cgagtcagacctatgagaagtgagcagtatcggggcaagaaccctctgttagtcccacta
ctctatgacttccggcgaatgacagcccggcgccgagttaaccgcaagatgggctttcat
gttatctataagacaccctgtggcctctgccttcggacaatgcaggagattgagcgttac
ctttttgagactggctgtgacttcctcttcctggagatgttctgtttggatccgtatgtt
cttgtggaccgaaagtttcagccctataagcctttttactatattttggacatcacctat
gggaaggaagacgttcctctatcctgcgttaacgagattgacacaactcccccaccccag
gtggcctacagcaaggaacggatcccgggcaaaggtgttttcattaacacaggccctgaa
tttcttgtcggctgtgactgcaaagatgggtgccgggacaagtccaagtgtgcctgccat
cagctaactatccaggctacagcctgcaccccaggaggccaaatcaaccccaactctggc
taccaatacaagagactagaagaatgtctgcccacaggagtttatgagtgtaacaaacgc
tgcaaatgtgaccctaacatgtgcacaaaccgcttggtacagcatggcctgcaagttcgt
ctgcagctcttcaagacccagaacaagggctggggtatccgttgcttggatgatattgcc
aaaggctcctttgtctgtatttatgcagggaagatcctgacagatgactttgctgacaag
gagggcctagaaatgggtgatgagtactttgccaatctggaccatattgagagcgtggag
aacttcaaggaggggtatgagagtgatgccccctgttcctctgacagcagtggtgtagac
ttgaaggaccaggaagatggcaacagcggtacagaggaccctgaggagtccaatgacgac
agctcagatgacaatttctgtaaggacgaggacttcagcaccagctcggtgtggcgcagc
tatgctacccgacggcagacccgcggccagaaggagaatggattgtctgagatgtcttcc
aaggactctcgccccccagacctagggcccccacatattcctgtccctccatcaatccct
gtaggtggctgcaatccaccttcctctgaagagacatctaagaacaaagtggcctcgtgg
ttgagctgcaacagtatcagtgaaggtggctttgctgactctgatagccattcatccttc
aagactagtgaaggtggggaaggccgcactgggggaggcagaggggaagctgagaaggct
tccacctcagggctgggcttcaaggatgagggagacatcaagcaggccaagaaagaggac
cctgatgaccgaaacaggatgtcgatagttactgaaagctctcgaaattatggttataat
ccttctcctgtgaagcctgaaggacttcgccgcccaccaagtaagactagtatgcatcag
agccgacgactcgtggcctctgctcagccaaaccctgatgatatcctgaccctgtccagc
agcacagaaagtgagggggaaagtgggaccagccggaagcccactgctggccagacttca
gccacagccatggacagtgatgatatccagaccatctcctctggctctgaaggggatgac
tttgaggacaagaagaacatgtctggtccaatgaagcgccaagtggcagtaaaatccacc
cggggttttgctttgaaatcaacccatgggattgccattaaatcaaccaacatggcatcc
gtggaaaagggggagagtgcacctgttcgtaagaacacacgccagttctacgatggggag
gagtcttgctacatcatcgatgccaagcttgaaggcaacctgggccgctacctcaatcac
agttgcagccccaacctgtttgtccagaatgtcttcgtggatactcatgatctccgcttc
ccgtgggtggccttctttgccagcaagagaatccgggctggcactgagctcacctgggac
tacaactatgaggtgggcagcgtggagggcaaggagctgctttgctgctgcggggccatc
gaatgccgagggcgtcttctttag

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