Capra hircus (goat): 102182838
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Entry
102182838 CDS
T02910
Symbol
COL21A1
Name
(RefSeq) collagen alpha-1(XXI) chain isoform X1
KO
K16629
collagen type XXI alpha
Organism
chx
Capra hircus (goat)
Pathway
chx04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102182838 (COL21A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
VWA_3
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
102182838
NCBI-ProteinID:
XP_017894760
EnsemblRapid:
ENSCHIG00000016502
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Position
23:complement(44384926..44639375)
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AA seq
957 aa
AA seq
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MAHHTTFLWIISVLLLQNSVLAEDGEIRSSCRTAPTDLVFILDGSYSVGPENFEIVKKWL
VNITKNFDIGPKFIQVGVVQYSDYPVLELPLGSHESGESLMAAMESIHYLGGNTRTGKAI
QFALDYLFAKSSRFLTKIAVVLTDGKSQDEVKNAAEAARDSRVTLFAIGVGSETEEAELR
AIANKPSSTYVFYVEDYIAISKIREVMKQKLCEESVCPTRIPVAARDEKGFDILLGLGIK
KKAKKRIQLSPTKIKGYEITSKVDLSEFTSNVFPEGLPPSYVFVSTQRFKVKKLWDLWRI
LTIDGRPQIAVTLNGVDKTLLFTTTSIINGSQVVTFADPRVKTLFDEGWHQIRLLVTEQD
VTLYIDDQQIENKPLHPVLGIFISGQTQIGKYSGKEETVQFDVQKLRIYCDPEQNNRETA
CEIPGFNGECFNGPSDVGSTAAPCICPPGKPGLQGPKGDPGQPGNPGYPGQPGQDGKPGY
QGIAGSPGVPGSPGIQGAQGLPGYKGEPGRDGEKGDRGLPGFPGLHGIPGSKGEMGPKGE
KGSPGFYGKKGAKGEKGNAGFPGLPGRAGEPGRHGKDGLMGSPGYKGEAGPPGAPGQDGS
RGEPGIPGFPGNQGLMGQKGDIGPPGPLGKKGAPGIPGLMGTDGSPGQPGAPGSKGNKGE
PGLQGLPGASGLKGEPGAVGPPGEPGYLGLPGIQGKKGDKGNQGERGIQGQKGENGRPGI
PGSQGIQGHHGAKGERGEKGEAGARGATGAKGESGVDGLMGPPGPQGPPGQAGPPGPPGL
DGKPGREFSEEFIRQVCTEVLRAQLPVLLQSGRIQSCDHCQPQHGSPGIPGPPGPMGPEG
PRGFPGLPGRDGVPGLMGAPGRPGAKGLKGLPGRNGAKGSQGLGYPGAQGPPGPPGPEGP
PGISKEGPPGDPGLPGKDGDHGKPGIQGQPGAPGICDPSLCFSVIVGRDPFRKGPNY
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggctcaccatactacatttctttggataatttcggtcctgcttcttcagaattctgtg
ttagctgaagatggggaaataagatcaagttgtcgtactgctccgacagatttagttttc
atcttggatggctcttacagtgttggcccagaaaactttgaaatagtgaaaaagtggctt
gtcaatatcacaaagaactttgacataggaccgaagtttattcaggttggagtggtccag
tacagtgactaccctgtcctggagctccccctggggagccatgagtcgggagagagcttg
atggcggccatggagtcaatacattacttgggaggaaacacacggactggaaaggccatc
cagtttgcccttgattacctttttgccaagtcctcacgatttctgaccaagatagcagta
gttcttacggacggtaaatcccaagatgaagtcaagaatgctgcagaagcagcaagagac
agtagagtaacgttatttgccattggtgttgggtcagaaacagaagaggcagaacttaga
gctattgccaacaagccttcatccacctatgtgttttatgtggaagactacattgcaata
tccaaaataagggaggtgatgaagcagaaactttgtgaagaatctgtctgtccaacacga
attcctgtggcagcacgtgatgagaaggggtttgatattcttttaggcttgggtataaag
aaaaaggctaagaagagaattcagctttcaccaacaaagattaaaggatatgaaataaca
tcaaaagttgatttatcagaattcacaagtaatgttttcccagaaggtcttcctccatca
tacgtatttgtctccactcagagatttaaggtcaagaaactgtgggatttatggagaatt
ttaaccattgatggaaggccacaaatagcagttaccttaaatggagtggataaaacatta
ttatttacaacaaccagcatcattaatggctcacaagtggtcacctttgctgaccctcga
gttaagacattatttgatgaagggtggcatcagattcgtctcttagtaacagaacaagat
gtaactctgtatattgatgatcaacaaattgaaaacaagccattacatccagtgttaggg
attttcatcagtgggcaaacccaaattggaaaatattctgggaaagaagaaactgttcag
tttgatgtccaaaagctacgaatctactgtgacccagagcagaacaaccgggagacagcg
tgtgaaatacctggatttaatggtgagtgcttcaacggtcccagtgatgtaggttcaacc
gcagctccctgtatttgtcctccaggaaaaccaggactacaagggcccaaaggtgaccct
ggacagcctgggaatcctggctaccctggacagcctggtcaagatggtaagcctggatat
cagggaatagcagggtcaccaggtgttccaggatccccgggaatacaaggagcacaagga
ctgccgggttacaaaggagaacctgggagagatggagaaaagggtgaccgtggacttcct
ggttttcctgggcttcatggaataccaggatcaaagggtgaaatgggccccaaaggagaa
aaaggatcacctggattttatggcaaaaagggcgcaaaaggtgaaaagggaaatgctggc
tttcctggccttcctggacgtgctggagaacctggaagacatggaaaggatggattaatg
ggtagccctggttacaagggagaagcaggacctccaggtgctccggggcaggatggatct
cgaggagaacctggcatcccaggatttcctggaaaccaaggattaatgggacaaaaagga
gatattgggcctccaggaccgctagggaagaaaggagctccgggaatacctggtttgatg
ggaaccgatggctcaccaggtcagcctggagccccaggatctaagggaaataaaggtgaa
cctggacttcaagggctgcctggggcttctgggctcaagggagagccaggagcggtgggt
cccccaggagaaccaggatacctgggtttacctggaattcaagggaaaaagggggacaaa
ggaaatcaaggtgaaaggggcattcagggtcaaaagggagaaaatggaagaccagggatt
ccaggatcacagggaattcaaggccatcacggtgcaaaaggagagagaggtgaaaaggga
gaggctggtgcccgaggtgccactggagccaaaggagagtctggggtggatggtctgatg
gggcccccaggcccccaggggccacccgggcaagcaggtcctccaggccccccaggactg
gatgggaaacccgggagagaattttcagaagagtttattcgacaagtttgcactgaggta
ttaagagcccagttacctgtcttacttcaaagtggaagaattcaaagctgtgatcattgc
cagccccagcatggctcccctggtattccagggccacccggtcccatgggcccagaaggt
ccccgaggattccctggtttgccaggaagagatggtgttcccggattaatgggagctccg
ggacgcccaggtgccaaaggactaaaaggcctccctggacggaacggggcaaaggggagc
caaggacttggataccctggagcacaaggtcctcctggtcccccaggtccagaagggccc
cctggaataagcaaagaaggtcctcctggagacccaggcctccctggcaaagatggagac
cacggaaaacccggaatccaaggacagccaggcgccccgggcatctgtgatccatcgctg
tgttttagtgtcattgttggaagagacccctttagaaaaggaccaaactattag
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