Capra hircus (goat): 102191339 Help Entry 102191339         CDS       T02910                                  Symbol SPG11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism chx  Capra hircus (goat) Pathway chx05014   Amyotrophic lateral sclerosis chx05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:chx00001]  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     102191339 (SPG11)    05022 Pathways of neurodegeneration - multiple diseases     102191339 (SPG11)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:chx03400]     102191339 (SPG11) DNA repair and recombination proteins [BR:chx03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      102191339 (SPG11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  102191339 NCBI-ProteinID:  XP_017909310 EnsemblRapid:  ENSCHIG00000016891 UniProt:  A0A452EXG3 LinkDB All DBs Position 10:220731..300588 Genome browser AA seq 2432 aa AA seqDB search MAAEERVLPVLLVPVSAEATGRLGSRAQLHREQAALGSLTASGSLHVLPLAPGGRGGGDC LLEGCFRQFVWEDSHHSGTPNNKPRLVALTENYELLIYEFNLKDGRCDATVLYSYSEKTL QKLVEDQNISISLLSLRILSFHNSTSLLFINKCVVLHVTFPERDAEIRVLSCYTLPLPAQ AVDRIIDTQLCRGILFVLSSLGWIYIFDIVGGRQVAQVDLALPQEDVCNEQQQEPAKSSS FTSLKVSQDLDVVVVVGFPNTAVAVNLTLYFRQYPGHLLCEKTLQDIPIEGPEGVDEDDP VNSDYNMKLTKFSFRIDRSWKAQLSSLNETVQSSKLGGSCCAPWFQDISHLESPESGDRS TSVSDWAFAPQDVTCSPCNFPQKGPARTSDPGQVWKRMRLREREEPLELTCVSVTGFTAL FTWAGEGTGWTIVLWDLETQSTQCFLLGKKCIPVDSGGVQQLCLVLTENGLSLILFGLTQ EEFLNRLMIHGSASTVDSLCHLNGWGRCSIPIHALEAGIENRQLDTVDFFLKSKENLLTP SSKSSVPDQFDHFASHLYLKHVEELTPALDLLCSAIRENDSETQSKHFSEQLLNLTLSFL NKQIKELFIHIEELDEHLQKGVDILTSYIDELRTFMIKFPWKLTDAIDEHDVDENVPKVK ESSIWERLSVEEVIANAILSNKIPEAQTFFRINSHSAQRLEELIRLGLDLVFDNLKKNNI EEASELLKNMGFNVKDQLLKICFHTTDKSIRDFLVEIFKEKNYFSEKEKRTVEFVHQVEK FYSGHLQENIQIQSLPRYWIKEQDFSKHKSVLDSFLKYDHKDNKQDHRIVLNWAQWWNQP TQESILLPRMNPEGYNSYSPEALWRYLTARHDWPSIILWIGEFQTQSSNASLEQNKWPPL TVDIVDQNTCCNNYMRNEILDKLARNGIFLTSELEDFELFLVRLNHVGGVMQNALAVQNY RSREGWDFHSRFILYCLEHGLQHLLYVYLDHYKLSPPNCPFLGKKELHEAHPWFEFLVQC RQVSSNLTDPRLIFQASLANAQILIPSNQASVSSMLLEGHTLLALATTVYAPGGVSQVVQ NGETENSLKKVDPQLLKMALTPYPKLKAALFPQYTTPSVLPPDITLYHLIQSLLPFDPSR LFGWQSANTLAIGDAASQLPHFSSPDLVGKYAVVERLNYAYYLRHGRPSFAFGTFLVQEL TKSKTPKQLIQQVGSEAYGLGLSCFHISSIGAACVCFLELLGLDSLKLRVDMKVANIILN YKCGSEDAQYNSIRESLAETLSKLAVGERAATEELLALLEEGVWAGMQQQEAQRLAHGPS SQWAVVAQFCRLHSTRPSTSYLRECARASDWLQFIVHSQLHGHHPEEVKYLLQHFSPVLQ DHLRLAFENLPSVSNSRMDSDQVCSTSSQELQRHKEETTNFFQLLLQCSEVPGSWCWLLR EAVRQKAPVLSVLASCLQDASAVSCLCVWIIASVEPRVAAEAGGPLQDSVEGRIWGLEDL SVIWRTLVTRQKIRTLIRGFQLFLKDSPLLLMMEIYELCMFFKNYKEAEAKLVEFQQSLE TLETAATRVPAAIPAPWLKEHVCFLLKLMLQQCGTQYELGRLLQLFVGIEHLFSDGPDVK KLCVLSQILKDTPTAINRALITSYSLESFQRECRSVLEKLETDGHFALARRVAELAGLPV DDLVIEEMTQEVQTLKRTDQWSLKQARIDFWKKCHENFKKNSISSRAAASFFSAQALWAG ECPAAGGPSSTEERHLLLTLAGHWLAREDPVPLEDLEGLEKQIWLCRVAQHTLMGSQEEG GPRAPQQASAGGDLSFDGLASEFSFSSLAVLNTSKYLELTGLPSRDVCGSELTWKEQASL TRLIGRLLDDGRVHEASRACRYFRFYHQDVALVLHCRALASGEASEDDLHPEILALLGSA ELPEEEEGAGVPLRKAQSTSSLDSRSFVTLPPADEVVTNLEILTSRCLHGKHCCRQVLCL YELAKELGCSYADVAAQDGEAVLRAILASQQPNRCKRAQAFISTQGLRPDTVAALVAEEV TRELLTPSEGTGHRQVFSPAEESQIFLQLTALCQDPTLVGMKLLEKISSVPHGELSCTTE LLILAHQCFTLTCHMEGITRVLQAARLLTDNHLAPSEEYGLVVRLLTGLGRYSEMTYALD LLHERHCFEMLMRKKLDPSGALKTALLDYIKRCRPGDSEKHNMLALCFSMCREIGENHEA AACIQLRLIESQPWEDHVKDGRRLKQLLLKALTLMLDAAESYAKDSCVRQALRCQRLTKL LTLQIHFLNTGQDTMLINLSRHRLTDCITALPRFYQASIVAEAYDFIPDWAEILYQQVIL KGDFNYLEEFKQQRLLRPSIFEEISIKCKHHQPTEFVLKNLRKFLTCCEDVYLYYKLAYE HKLYDVVNVLLKDPQTGCCLKDMLAGVASTIL NT seq 7299 nt NT seq  +upstreamnt  +downstreamnt atggctgcggaggagcgggtgctacccgttttgttagtgccggtctccgccgaggccaca gggcggctggggtcccgggcgcagctgcacagagagcaggcggccctgggcagtctgacg gcttcaggcagccttcacgtgctccccttggcgccgggcggccgaggcgggggcgactgc ctgctggaaggctgttttcggcagtttgtatgggaggattctcatcacagtgggacacca aacaacaagcccagactggttgctcttactgaaaattatgaactgctcatctatgaattt aatttgaaagatggaagatgtgatgcaaccgttttgtatagctatagtgagaagacattg cagaagcttgttgaagatcaaaatatcagtatttccttgttatctttgaggattctgtcg tttcacaacagcacatcattattgttcatcaacaaatgtgttgtcctacatgttacgttt cctgaaagagatgctgaaattagggtcctcagctgttacacgttgcccttacctgcgcag gcagtggacaggattattgacacgcagctctgcagaggaattctctttgttttgagtagt ttaggctggatctacatttttgatattgtgggtggcagacaagtagctcaggtggattta gcacttcctcaggaagatgtgtgtaatgagcagcaacaggagccagccaagagctcttcg tttacttcactgaaagtgtctcaggacctggatgttgtcgtggtggtgggcttccccaac actgcagttgctgttaacttgactttgtacttcaggcaatacccaggacatctgttgtgt gagaaaactctacaggacatccctattgaaggtcccgagggggtcgatgaagatgatcct gttaattctgactacaacatgaaactgaccaagttttccttccgaattgataggtcttgg aaagcccagctgtcgtcattgaatgaaacggtacagagttccaagctgggagggtcctgc tgtgctccgtggttccaggatatttcgcatctggagtcccctgaatctggtgaccgcagt accagtgtgtcagactgggcctttgctccacaggatgtgacgtgtagcccgtgtaatttt ccacagaaaggccctgcgaggaccagtgacccaggacaagtgtggaaaaggatgcgcctc agggaacgggaggagccccttgagctcacctgcgtgtctgtgacaggcttcactgcactg ttcacttgggcaggggaaggcacaggctggaccattgtcctgtgggacttggagacccag agcacgcagtgttttttgctgggcaaaaagtgtattcctgtagacagtggtggagtccag cagctgtgcctcgtcttgacagaaaatggactctctctgattttgtttggtttgactcaa gaggaatttttaaataggctgatgatccacggaagtgccagcactgtggactctctttgc catctcaatggttgggggcggtgttccatccccatacacgcgctcgaggcaggtatagaa aatcgtcagctggacacagtagatttctttttaaagagcaaggaaaatcttctgactcca tcctcaaaatcttctgtacctgatcagtttgatcactttgcatcccatttatatttaaaa catgtggaagagctgacaccagcattggatttactttgctcagcaattagagaaaatgat tctgaaacccaaagcaaacacttttcagaacagttgcttaaccttacactgtcttttctt aacaaacaaataaaggagctttttattcacattgaagagctagatgaacatctacagaaa ggagtggacattttgaccagctacattgatgaacttcgaaccttcatgataaagtttccc tggaagctaacagatgctatagatgagcatgacgtagatgaaaatgtccccaaagtaaag gagagcagcatatgggagaggctcagtgttgaggaagttattgccaatgccattttaagc aacaaaataccagaggcacaaactttcttcaggattaacagtcattctgctcaaagactt gaggagttgattagactaggcctcgatttggtctttgacaatttgaaaaagaacaacata gaggaagcctctgagcttttgaagaatatgggctttaacgtaaaagaccagttgctcaag atatgcttccatacaactgataaaagtatacgggactttctggttgaaatttttaaagaa aaaaattatttttctgaaaaagagaaaaggactgtagagtttgtgcatcaagttgagaag ttttattcaggacatttacaagaaaatatacagatccagtctttacccaggtattggata aaggaacaagatttttccaagcacaagtctgttttggactcgttcctgaaatatgatcat aaagataacaagcaggatcatagaattgtgttaaattgggctcagtggtggaatcagcca acacaagaatccatccttctcccccggatgaatccagaaggatataactcatattctcct gaagccctctggagatacctcacagcacgccatgactggcccagcattatcctgtggatt ggagaatttcagacccagagcagtaatgcttcacttgagcagaataaatggccgcctctg actgtagatattgttgatcagaatacttgttgcaacaactacatgagaaatgaaatttta gataagctggccaggaatggaatttttcttacatctgagttagaagactttgaactcttc cttgtcagactgaaccatgttgggggtgtgatgcagaacgccctcgctgttcaaaactat aggtccagagaagggtgggatttccactctcgcttcatcctctattgtctggagcacggt ctgcagcaccttctttatgtctatctggaccactacaaacttagtcctccaaattgtcct tttttgggaaaaaaagaattacatgaggctcacccttggtttgaatttttagttcagtgt cgacaagtttccagtaatttaacagatcccagactgatcttccaggctagccttgcaaat gctcagatactgattcccagcaaccaggccagtgtcagcagtatgctgttggaaggacat accctcctggcccttgctaccacagtgtatgcccctgggggcgtcagccaggttgttcag aatggagaaactgagaactctctgaagaaagtagatccccagctactgaagatggcattg actccttacccaaagcttaaagctgctctgttcccacagtacaccacccctagtgtcctg cctcccgacatcacactctaccacctcattcagtcattgttgccctttgatcccagcaga ttgtttggctggcagtctgccaacacattggctataggagatgcagcgagtcagctccca catttctctagccctgacctggttggtaaatacgctgtagtagagcgtctgaattatgct tattatttacgtcatgggcggccgtcatttgcgtttggtactttcctggttcaggaatta accaagagcaagacccccaagcagctgatccagcaagtaggcagtgaagcctatggttta gggctctcctgcttccacatatcttcaataggagccgcctgtgtatgcttcttagaattg cttggtctcgacagcctcaagctcagagttgatatgaaagtggccaatataattttgaac tacaagtgtggaagtgaagatgctcagtacaactctatcagagagtctctagctgaaacg ctgtctaaacttgctgtgggggagagggcagccacagaagagctgcttgctctcttagaa gaaggcgtgtgggccggcatgcagcagcaggaagcgcagaggttagcccatggacccagc agccagtgggcagtagtggcgcagttctgcaggctccacagtacgagaccaagcacatct taccttagggagtgcgccagagcaagtgattggctgcagtttattgtccacagccagctc catggccaccacccagaggaggtgaaatatcttctccagcatttcagccctgttcttcag gaccacttaagactggcttttgagaacttgccctcagtgtccaactccagaatggacagt gaccaagtctgcagcacgtcctcccaggaactccagagacacaaagaagagacgacgaat ttctttcagcttctgcttcagtgttcagaggtgccaggctcctggtgctggctgctgaga gaagcagtgagacaaaaggccccagtccttagtgtcctggcctcgtgtctccaggatgcc agtgctgtctcttgcctctgtgtctggatcatcgcctctgtcgagccccgcgttgccgct gaagcagggggaccccttcaggactcagtggagggccgcatctggggcctagaggacctc tccgtcatctggaggacattggtgacaaggcagaagatcaggactctgatcagaggcttc cagcttttcttgaaggattccccactcctcttgatgatggagatatatgaactctgtatg ttcttcaagaattataaggaggctgaagctaaacttgtggagttccagcagagccttgaa actcttgagacagcagccacaagggtccccgctgccatccctgcgccgtggctgaaggag cacgtgtgttttcttttgaagcttatgctgcagcagtgtggcacccagtatgagctgggg aggcttttacagctgtttgttggaatagagcatctcttctctgatggcccagatgtgaag aagctgtgtgtcctcagtcagattctgaaggatacacccacagccattaaccgtgcactc attaccagctacagccttgagagtttccagcgtgaatgtaggtcagttttggaaaaactg gagacagacggacactttgctttggccaggagggtagcagaactagctgggctgcctgtg gacgacttggtgattgaagagatgacacaggaagtgcagaccttaaagcgcactgaccag tggtccctgaaacaagcacgaattgacttctggaaaaaatgtcacgagaattttaagaaa aattccatttccagcagagcagcagcttcttttttctcagcccaggccctgtgggcaggt gagtgccccgctgcagggggccccagcagcaccgaggagcgccacctgctgctcacgctg gcggggcactggctcgcccgggaggacccagtgcctctggaggacctggagggcctggag aagcagatctggctctgccgtgtcgcccagcacaccctcatgggcagccaggaggaagga gggcccagggcgcctcagcaggcctcagctggaggtgacctttcctttgatggcttagcc agtgagttttcgttctctagcttggctgttctgaacacatcgaaatacttagaactcact ggccttccatccagagacgtttgcggcagtgaactgacctggaaggagcaggcgtccctc acccgtctgatcgggcgcctgctggatgacggccgtgtgcacgaagcaagccgagcgtgc cggtatttccgtttctatcaccaagacgtcgccttggtgctgcactgcagggcgctcgct tcaggggaggctagtgaggatgacctgcacccggagatcctcgcgctcttggggagtgct gagcttcctgaggaagaagagggagctggcgtccccctaaggaaagcccagagcacttcc agtctggacagtcggtcgttcgtgacgctgccccccgcggatgaagtggtgacgaacctg gagattctgacaagcaggtgccttcacgggaagcactgctgccggcaggtcctctgtctc tacgagctcgccaaggagctgggctgttcctatgcagacgtcgctgcccaggatggtgag gccgtgctccgggccatcttggcctctcagcagcctaatcgatgcaagcgagctcaagcc ttcatcagcacccagggcctcaggccagacacagtggctgcacttgtggctgaagaggtg acccgggagctgctgacaccgtcggagggaacaggacacaggcaggtgtttagcccagca gaggaaagccagatatttcttcagctgaccgctttgtgtcaagaccccaccttggtgggc atgaagttgttggagaagatttcctctgttccccacggggagctgtcttgcaccacagag ctgctgattctggctcatcagtgcttcacgctgacctgccacatggagggcatcacgcgc gtcctgcaggccgcccggctgctcaccgacaaccacctggcccccagtgaggagtacggg ctggtggtgcgcctcctcactggcctcggcaggtacagcgagatgacgtacgcgctcgac ctgctgcacgagaggcactgctttgagatgctcatgaggaagaagctggaccctagtggc gccctgaagacggccctgctggactacatcaagcgctgccgccccggggacagcgagaaa cacaacatgctcgcgctgtgcttcagcatgtgccgggagatcggcgagaaccacgaggca gccgcctgcatccagctgagactgatcgagtcccagccctgggaggaccacgtcaaggat gggcggcgactgaagcagctgctgctgaaggccctgactctgatgctggacgcggcagag agttacgccaaggactcctgcgtgcgccaggccctgcgctgccagcggctcaccaagttg ctaacgctgcagattcactttctgaacaccggccaggacaccatgctcatcaacctgagc cgccacaggctgacggactgcatcacggccctgcctcggttctaccaggcttccattgtg gcagaggcctatgactttattcctgactgggctgaaattctgtatcaacaagtgattctt aaaggagactttaattacttggaagaattcaagcagcaaaggttattaagacccagtata tttgaagagatttcaataaaatgtaaacatcatcagcctacagaatttgttctgaaaaac ctgaggaagttccttacatgctgtgaagacgtctacctgtattacaagctggcgtacgaa cacaagctttatgatgttgtcaatgtgcttctgaaggaccctcagaccggctgctgtctg aaggacatgctagcaggggtggcttctaccatcctatga

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