Clostridium isatidis: BEN51_09455
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Entry
BEN51_09455 CDS
T05663
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cia
Clostridium isatidis
Brite
KEGG Orthology (KO) [BR:
cia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cia03400
]
BEN51_09455
DNA repair and recombination proteins [BR:
cia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BEN51_09455
Archaeal homologous recombinant proteins
BEN51_09455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
SMC_N
AAA_29
AAA_15
ABC_tran
AAA_22
AAA_30
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ASW43698
UniProt:
A0A343JDU0
LinkDB
All DBs
Position
complement(2000330..2003458)
Genome browser
AA seq
1042 aa
AA seq
DB search
MKIKKLIISAFGPYAEKQELNFEENLKDKNIFVITGNTGAGKTTIFDAINFALFGEASGS
EREGKNLRSDFASLETKTEVELWFSMRNKDYYVKRSPQYYRKKQRGEGFTESKAVAELKY
KDKTITGYKEVTRAVEEILGINSEQFKQLVMIPQGEFKKLLNSDSDKKEEIFRKIFGTKI
FSDIQQNIKNEANELKRNIELIQRDRENNIKSFMINEENITLKEMITARDMNIEQIIKGF
EEEISVDQEMISNLKDELDKFQEEIETLSKELALINENNKKLEKKNNIKLEFERLSCLKE
NYKEKSVILEKAKKALKLDLYEKDYRYKKSLYDEVNFKLNEAIKNIEKYKKDYDLAFKRL
QEEKAKEEEKNILLSQLNEIDKLKEKASRYEKNKAKVNKLKIFIEDLEKEINNINLEIKG
NSDLINKLAIELENISSLKNKKNTLEINVINLNKKIEDLNILLNSLESYKRESNKHSNLT
LVYEEADKSYVAAKNYYENLEEAFRRNQAGILAKNLIEGEPCPVCGSLHHPKLAVLNSEV
IDENLVKEAKVKADKLYEIREKYYRDLSKINANLESNKREIIFPLLMKIFASNNLEDISL
EIEKVLGLIKKNNFELLNINKEIEGISLLVNKEEEKIKEKKNKEARIEKLRNYLEEKNKE
LLSNKENLKIEETNLKNIEEEFNGNVKSYNELENIRREINYKIEELKKNYEKAEAEYNLL
KSNLDKENGNKQSLEIRSKESKKDLEEAIEIFKEKTLALGFKDGRDYKNSQLKEEEIETL
ERDINNYINNLANTEKLLKDITKECEGLIKKDIKELEIKIESYKDNKLKIQKIEKKLYSK
IDQNIKLLKNIEKNNELIEKDEKKYSVIGRLSKIINGDNSRKISFERYVLASYFEDIITA
ANLRLSRMSCNRYELLRKEEVGDKRKGQGLDLEVFDNYTGKSRDIKTLSGGEAFKASLSM
ALGLADVVQAYSGGIQLDTIFVDEGFGTLDSESLDNAIECLVELQNDGRVVGIISHVQEL
KDRIDSKIVITSTNKGSNAKFN
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaaaaattaataatttcagcttttggaccttatgcagaaaaacaagaatta
aattttgaagaaaatttaaaagataaaaatatatttgtaataacaggaaatacgggagca
ggtaaaacaacaatttttgatgccattaactttgctctttttggagaggcaagtggaagt
gaaagggaaggtaaaaatttaagaagtgattttgcttctctggaaactaagacagaagtt
gagctatggttttcgatgagaaataaggattattatgtaaaaagatcacctcaatattat
agaaagaaacaaagaggtgaaggatttacagaaagtaaggctgttgcagaactaaaatat
aaagataaaacgataacaggatataaagaagtaacacgagcagtagaagaaattttaggt
attaattcagagcaattcaagcaattagttatgatacctcaaggggagtttaaaaagtta
ttaaattctgatagtgataagaaggaagaaatatttagaaagatatttggaacaaaaata
ttttcagatattcagcagaatataaagaatgaagcaaatgaattaaaaagaaatattgaa
cttatccaaagggatagggaaaataatattaagtcctttatgataaacgaagaaaatata
actttaaaagaaatgattactgctagggatatgaatattgagcaaataataaaaggtttt
gaagaagaaataagtgtagatcaagagatgatttcaaatttaaaggatgaattagataag
tttcaagaggaaatagaaactttatctaaggaattagcattaataaatgaaaataataaa
aagttagagaaaaagaataatataaaattagaatttgaaaggctttcatgcctaaaagaa
aattataaagaaaagtctgttattctggaaaaggcaaaaaaggcattgaaattggacctt
tatgaaaaagattataggtataaaaaatctttatatgatgaagtaaattttaaattaaat
gaagctataaaaaatatagaaaagtataaaaaagattatgacctagcatttaagagatta
caagaagaaaaagccaaagaagaagaaaaaaatattttattaagtcaattaaatgaaata
gataaattaaaggaaaaagcttctagatatgaaaaaaataaggcaaaagtaaataaatta
aagatttttatagaagatctggaaaaagaaattaataatataaatttagagataaaaggt
aatagtgatttaataaataaattagcaatagagttggagaatataagtagtttaaaaaat
aaaaagaatacattggaaataaatgttattaatttaaataagaaaatagaagatttaaat
atattattaaattctttagagagttataagagggaaagtaataaacattcaaatctgact
ttagtctatgaagaggcagataagtcttatgtagcggctaaaaactattatgaaaattta
gaagaggcttttaggagaaatcaagcaggaatacttgccaagaatttaatagaaggggaa
ccttgcccagtatgtggttcacttcatcatccaaagctagctgttttaaatagtgaagtt
atagatgagaatttggtaaaagaagcaaaagttaaagcagataaattatatgaaattaga
gaaaaatactatagagatttatctaaaataaatgcaaatttagaatcgaataaaagagaa
ataatatttcctctattaatgaaaatatttgctagtaacaatcttgaagatatatcatta
gaaattgagaaagttttaggattaataaagaaaaataattttgagttattaaatattaat
aaggaaatagaaggaatatctttattagttaataaggaagaagaaaagattaaggaaaag
aagaataaagaggcaagaattgagaagttaagaaattatttagaagagaaaaataaagaa
cttttatctaataaagaaaatttaaaaatagaagaaactaatttgaaaaatattgaagaa
gaatttaatggaaatgttaagtcttataatgaacttgaaaatataagaagagaaattaat
tataaaatagaagagctaaaaaagaattatgaaaaagctgaagcagaatataatttatta
aaatctaatttagataaagaaaatggaaacaagcaatctttagaaattaggtcaaaagaa
tcaaaaaaagatttagaagaagctattgagatatttaaggaaaagactttagcattaggc
ttcaaagatggacgtgattataaaaacagtcagcttaaagaagaagaaatagaaacttta
gaaagggatatcaataattacatcaacaacttagccaatacagaaaaattattgaaagat
attactaaggaatgtgaagggctaataaaaaaagatattaaggaattggaaataaaaata
gaatcttataaagataataaattaaagatacagaagattgagaaaaagttatattctaaa
atagatcaaaatataaaactattaaagaatattgaaaagaataatgaattaattgaaaaa
gatgaaaaaaagtatagtgttataggaaggctttcaaagattattaatggtgataacagt
agaaaaataagctttgaaagatatgtattagcttcatattttgaagatataatcactgca
gcaaatttaagactttctagaatgagctgtaatagatatgaacttttaagaaaagaagaa
gttggagataagagaaagggacaaggcttagacttagaagtatttgataattatacagga
aaatctagagatataaaaactctatcaggtggggaagctttcaaagcatcattgtctatg
gctttaggtttagcagatgtggtacaagcttattcagggggaatacagttagatactatt
tttgtggatgaaggttttggaactttggattcagaatctttagataatgctatagaatgt
ttagttgaactccaaaatgacggaagagtggtaggtataatatctcatgtacaagaattg
aaggataggatagattcaaagatagttattacatctactaataaaggaagcaatgctaaa
tttaattaa
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