Citrus x clementina (clementine): CICLE_v10010897mg
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Entry
CICLE_v10010897mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CICLE_v10010897mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10010897mg
Enzymes [BR:
cic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
CICLE_v10010897mg
Ubiquitin system [BR:
cic04121
]
Ubiquitin ligases (E3)
HECT type E3
CICLE_v10010897mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
Arm
Nuc_deoxyri_tr3
UTP15_C
Htt_N-HEAT_1
Motif
Other DBs
NCBI-GeneID:
18039255
NCBI-ProteinID:
XP_006428879
UniProt:
V4URF7
LinkDB
All DBs
Position
Unknown
AA seq
1463 aa
AA seq
DB search
MGNRGQKRMEMAVDLPDDKRACSSLDFRPSTSNSSVQTHLNSTNSTPETHHNDMDTSSSA
SASSRSEEEPEKDAGYGSCDSDDAEPRHRGLRELQRRRSSSDHGKLRSILACLSEDTDPS
RQITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDIMLLAVRAITYLCDIF
PRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKISRDQPHACLEGGAIMAALTYI
DFFSTSIQRVALSTVANICKKLPSECPSHLMEAVPILSNLLQYEDRQLVESVAICLIKIA
EQLSQSSQMLDELCSHGLINQTTHLLNLNSRTTLSQPIYYGLIGLLVKISSGSIVAFKML
YELNIGRILKDILSTYDLSHGMSSPHMVDGHCNQVHEVLKLLNELLPTSVGDQCAQQVLD
KQSFLVDRPDLLQNFGMDILPMLIQVVNSGANIFFCYGCLSVINKLVYLSKSDMLIELLK
SANIPSFLAGVFTRKDHHVVILALEIAEMILQKLSDTFLNSFVKEGVFFAIDALLTPEKC
SQLFPAFSGIQLCPSSSQKCAGREVLRCLCNAFDTGLSSSASEKQSCKLDKDSVHNLAKS
IITKYFSPELFGSDKGLTDILQDLRSFSAALTDLMNVCTNNEAHARDEEKFYCILHQIME
KLNGREPVSTFEFIESGIVKSLVTYLTNGLYLRDNAELHIPHSDLFVVEKRFEVLARLLL
PYSDNLSEDSLVSALIQKLQSALSSLENFPVILSHSFKLRSSYATVPYGRCISHPCLRVR
FVRGDGETCLSDFSEDLLTVDPFSSLEAIEGYLWPKVTIKESKDVESDCLMDQMNGQPLH
LSSNSKSILGESSESMEHESTSAVLTPVKHDSISSTSGVPKMQDCKIKLTFDLDGQKLER
TLTLYQAILQKQIKTDGEVIAGAKLWSQVYTIIYRRTMESKCNDPKKCVHLHPMSSVSDG
DEARLHCASFFSSLFACQLAFELDNSSPIYDILFLLKSLEGMNRLTCHLISHERIRAYAE
GRFDNLDDLKVAVHSLRQNDFVNSKLTEKLEQQMRDSAAVSTGGVPSWCNQLMASCPFLF
SFEARCKYFQLAAFAPRQVQPHPLYRSNSGAPTDRRSAAVGLPRKKFLVCRNRILESATQ
MMDQHACNRTLVEVEYDEEVGSGLGPTLEFYTLVSQEFQKSGMGMWRDDHSSVTVRKSLE
IGNSDIVMSPFGLFPRPWSSAVDTSYGIQFSDVLKKFVLLGQVVAKALQDGRVLDLPFSK
AFYKLILGKELSLYDIQSFDPELGRTLLEFQAIANRKKHLESTSEERSMFGLESCFRNTR
VEDLCLDFTLPGYPDYVLTFGPDHKMVNMNNLEDYAELVVDATIHTGIFRQMEAFKSGFC
QVFPIEHLKIFTEEELERLFCGERDFLAFNDLLDHIKFDHGYTASSPPILNVSDAYFLLF
GVFVLTFHPMIFQSSLTLLNVSY
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcgtggacaaaagcgcatggaaatggctgttgatttgccggatgataaaaga
gcttgtagttcattggactttcggcctagcacatctaactcatcagtccaaactcacttg
aattccacaaactccactcctgaaacccatcataatgatatggatacttcttcttctgct
tctgcttcaagccgatctgaagaagaacctgaaaaagatgcagggtatggttcgtgtgat
tctgatgatgcagaaccaagacacagaggtctcagggagttacagaggagaagatcctct
agtgatcatgggaaattgaggagtattttggcgtgtttgagtgaagatactgatccttct
aggcaaataacttcactgactgagctttgtgaagtgttgtcatttgctatggaggattca
ctttctagcatgatggcagactcgttgtccccagttcttgtaaagctggcaaggcatgag
actaatccagatataatgttattggctgttagagctataacatatttatgtgatatattt
cctcgatcatcgggtctgcttgttcgacacgatgcagttcctgctctttgtcaaagatta
aaggcgattgagtacttggatgtagctgagcagtgtttgcaagcattggagaaaatttcc
cgggatcaaccacatgcttgcttagagggtggggctattatggctgctttaacttatatt
gatttcttctcgactagtatacagagagttgcactttccactgtagccaacatatgtaag
aaacttccttcagaatgtccgtcacatttaatggaggctgttcccatattgagcaatctt
cttcagtacgaggatcgacagctggttgagagtgtagccatttgtttgataaaaatagca
gagcaattaagtcaatcttctcagatgctggatgaactctgtagccatgggctgattaat
cagaccacgcatctcttaaacttgaatagccgaactactctatcccagccaatttactat
ggtttgattgggttacttgtcaaaatttcttctggttcaattgtagctttcaaaatgtta
tacgagcttaatattggcaggatattgaaggatattttatcaacttatgacctctcacat
ggaatgtcttctcctcatatggttgatggtcattgcaatcaggtacatgaagttttgaag
ttgctaaatgagcttcttcctacttcagttggagatcagtgtgcgcaacaagtgttggat
aagcaatcatttttagttgatcgtcctgatcttcttcaaaactttggaatggatatactt
cccatgttgatccaggtggttaattctggtgcaaatatctttttttgctacggatgcctc
tctgtaatcaacaagttagtttatttgagcaaatctgacatgcttattgaattgcttaag
agtgccaacattccgagctttttggctggagtgtttactcgaaaggaccatcatgtggtc
atattagctctagagattgctgaaatgatcctgcaaaagctttctgatactttcttaaac
tcttttgtaaaagagggtgtcttttttgccattgatgcactattaacgccagaaaaatgt
tcgcagctatttccagcatttagtggcatccagctttgccctagctcaagtcagaagtgt
gctggaagggaggttctgagatgcttatgtaatgcttttgatactggtctgtcttcttca
gcttcagaaaaacaatcttgcaagcttgataaagattctgttcataatcttgcaaagagc
attataaccaaatacttctcaccagaattatttggctctgataaaggactgactgatatt
cttcaagaccttagaagtttttctgctgctttgaccgatttgatgaatgtgtgcactaat
aatgaagctcatgcacgggatgaagagaaattttattgtattttacatcagattatggaa
aagcttaatggaagagaaccggtttccacttttgagttcatcgagagtggaattgtcaaa
tcgttggttacatacctgacaaatggattgtatctgagagacaacgcggagcttcatatt
ccacatagtgatttatttgtagtagaaaaacgatttgaggtgcttgcaagactacttttg
ccttattcagacaatctctctgaggactcactggtgtcagctctgatacagaaattacaa
agtgcattgtcgtctttagaaaatttccctgttattttgagtcattcattcaagctgaga
agttcatatgctactgttccatatggacgctgcatatcacatccatgtctcagggttcgt
tttgtgaggggagatggggagacatgcttatctgatttctcagaagatcttttgactgtt
gatcctttttcttctttggaagctattgaaggatatctgtggcctaaagttactatcaaa
gaatccaaagatgtagaatcagattgcctgatggatcaaatgaacggccaacctcttcat
ttgtcatcaaattccaaatctatcctaggggaaagttcagaatctatggaacatgagagc
acttctgctgtattaactcctgtgaagcatgatagcatatcctctacctctggtgttccg
aagatgcaggattgtaagatcaaacttacgtttgacctagacgggcaaaagctggagcgg
acattaacattgtatcaggcaattcttcaaaagcaaataaaaacagatggtgaagttatt
gccggggcaaaattgtggagccaagtatacacaataatttatagaagaaccatggaatct
aaatgcaatgatcctaaaaaatgtgtccatttgcatccaatgtcctctgtatcagatgga
gatgaggcacgtttgcattgtgcttcatttttctccagcttgtttgcttgtcaactggcc
tttgagttggataattcaagtcctatttatgatatattgttcctacttaagagtttggaa
ggcatgaacaggttaacatgtcatttgatatctcatgagagaatacgtgcatatgctgaa
ggcagatttgataacttggatgacctgaaggtagcagttcactcattgcgacagaatgat
tttgtgaatagtaagttgacagaaaaactagaacaacagatgcgcgacagtgcggctgtt
tcaactggtggtgtgccgtcatggtgtaatcagttaatggcttcatgcccattcttgttt
agttttgaagcaaggtgcaagtattttcagttagcagcatttgctccacgacaggttcag
cctcatccattatatcgcagtaactcaggtgcccctactgacaggcgatcagctgctgtt
ggcttgccgcggaagaagtttttagtgtgccggaaccggattctggagtctgccacacaa
atgatggatcagcatgcttgtaatagaacacttgtcgaagtggaatatgatgaagaagtt
ggttctggtcttggtcctacattagagttttatactcttgtcagtcaagagtttcagaag
tctggtatgggcatgtggagagatgatcacagttcagtaactgtcaggaaaagcttggaa
attgggaattctgatattgtaatgtctccttttggtctgtttccccgtccctggtcatct
gccgtagatacatcatatgggatacagttctcagatgtattaaaaaagtttgttcttttg
ggtcaagttgtggcaaaggctcttcaagatggaagggtcttggatctgcctttctccaaa
gccttttataagctcattcttggaaaggaacttagtttgtatgacatccaatcatttgac
cctgagcttggtaggactctgctggagtttcaggccattgctaatagaaaaaaacatttg
gaatcaacttctgaagaaaggtcaatgtttggccttgaatcatgttttcggaatacccga
gttgaggatctctgtctcgattttacactacctgggtaccctgattatgttctcactttt
gggcctgatcataaaatggtgaatatgaacaacttggaggattacgcagaacttgttgtg
gatgctacgatacatactggaatattcagacaaatggaagctttcaagtctggattttgt
caagttttccctattgaacatcttaagattttcactgaagaggagctcgagcgtttattc
tgtggagaacgtgactttttggcttttaatgaccttttggatcatatcaagtttgatcat
ggatacacagctagcagtcctcccattttgaacgttagtgatgcttattttctccttttt
ggtgtttttgttttaacttttcatcccatgatatttcagtcttctcttactcttctgaat
gtcagttattag
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integrated database retrieval system
