KEGG   Citrus x clementina (clementine): CICLE_v10027764mg
Entry
CICLE_v10027764mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
cic  Citrus x clementina (clementine)
Pathway
cic04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cic00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    CICLE_v10027764mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cic04131]
    CICLE_v10027764mg
Membrane trafficking [BR:cic04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    CICLE_v10027764mg
SSDB
Motif
Pfam: Clathrin WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 18034366
NCBI-ProteinID: XP_006424418
UniProt: V4RSV8
LinkDB
Position
Unknown
AA seq 807 aa
MAPFPAENGVEGDDEREEEEEEDEDEEEEEEEEEEEPRLKYQRMGGSLPSLLANDAASCV
AVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVIN
SLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAGGLAGHLYLNSKKWLGYRDQVLHSG
EGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITFIERPRGSPRPELLLPHLVWQDDTLL
VIGWGTYVKIASIKTNQSNGANGTYRHVGMNQVDIVASFQTSYYISGIAPFGDCLVVLAY
IPGEEDGEKEFSSTLPSRQGNAQRPEVRIVTWNNDELTTDALPVLGFEHYKAKDYSLAHA
PFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVEAGQ
GRSELLDEVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPY
MPTENPRLRDTAYEVALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQLNSSSM
TDALKEALAELYVIDGHYEKAFSLYADLMKPYIFDFIENHNLHDAIREKVVQLMLLDCKR
AVSLLIQNKDLITPSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELY
ADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDI
EEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLR
DRLVKIITDYRTETSLRHGCNDILKVL
NT seq 2424 nt   +upstreamnt  +downstreamnt
atggctccgtttccggcggaaaacggcgtcgaaggcgacgacgagagagaagaagaagaa
gaagaagacgaagacgaagaagaagaagaagaggaggaggaggaagagccaaggctcaag
tatcaaagaatgggaggcagcttaccttctcttttggcaaacgacgccgcttcgtgcgtt
gctgtagctgaacggatgatcgctctcggtactcacgccggcacagttcatattcttgat
tttttggggaatcaggttaaggagtttcctgctcatactgctgctgtcaacgaccttagc
tttgatgtagatggcgaatatgtaggaagttgttcggatgatggttctgttgtgataaat
agccttttcactgatgaaaaaatgaagttcgattatcatcgcccaatgaaggccatttca
ctggacccagattataccaggaaaatgtctagaagatttgttgctggaggcttagcaggt
catttatatttaaattcaaaaaaatggctaggctaccgagaccaggttttgcactctggt
gaaggtccagttcatgtggtgaagtggaggaccagcctcattgcttgggccaatgatgcg
ggtgtaaaagtttatgatgctgccaatgatcagcgtataacatttattgaaaggccacga
ggaagcccacgtcctgagctcttgcttcctcatttagtttggcaggatgacactctcttg
gtcattggttggggcacgtatgtcaaaattgcatcaattaaaacaaatcagagtaatggt
gcaaatgggacatataggcatgttggcatgaaccaggtggacatagtggcatcttttcag
accagctattatatttcaggaatagctccatttggtgattgtttggttgttctggcttat
attcctggagaggaagatggagaaaaggaatttagtagcactcttccatcacgacagggg
aatgctcagagacctgaagtacgtatagttacatggaataatgatgaacttacaacagat
gccctaccagtacttggctttgagcattacaaggcaaaggactattcccttgctcatgct
cctttttcaggtagcagctatgctggagggcaatgggctgctggtgatgaaccattgtat
tatattgtatccccgaaggatgtagtcattgcaaaacccagggatgctgaagatcatatt
gcttggcttcttgaacatgggtggcatgaaaaagcattagcagcagttgaagcaggccaa
ggacggagtgaactccttgatgaggtgggatctagatatcttgatcatttgattgttgaa
aggaaatatgctgaagctgcatctctgtgtcccaaattattaaggggatcggcatcagca
tgggagagatgggttttccattttgctcatcttcgtcagcttcctgtattggttccatac
atgccaacagaaaatccaagattgagggatactgcttatgaggttgcactggtagcactg
gcaacaaacccatctttccataagtatcttttgtcaactgttaaatcctggcctcctgtg
atttactctgcattgcctgttatatctgccatagaacctcagctaaattcttcatccatg
accgatgcactcaaggaggcactagcggagttgtatgttattgatgggcactatgagaaa
gctttttcactttatgctgatcttatgaagccgtatatatttgacttcattgaaaatcac
aacttacatgatgccattcgtgaaaaggttgtgcaactgatgctcttagattgcaagcgt
gcagtctctttgttgatccagaacaaggacttgattactccatctgaagttgtgacacag
ctactcaatgcaagggacaagtgtgattcgagatattttttgcatttatacctgcatgca
ttatttgaagtaaatccgcatgctggaaaagattttcatgatatgcaggtagagctttat
gccgactatgatctgaagatgctacttccttttcttcgcagtagtcagcattacacactt
gagaaggcatatgaaatttgtgtgaagagagatcttttacgggagcaggtgttcattctt
ggaagaatggggaatacaaaacatgccctagctgtgatcattaataaactaggggacata
gaagaggctgtagaatttgttaacatgcagcatgatgacgaactttgggaagagttgatt
aagcaatgccttaacaaacctgaaatggttggtgtgttgttggagcacactgttggcaat
ctcgatcctctatatatcgtaaatatggtgcccaatggcttagagattcctcgtctgaga
gatcgcctggtgaaaattattactgattacaggactgaaacatctcttagacatgggtgc
aatgacattctgaaggttctctga

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