Citrus x clementina (clementine): CICLE_v10028917mg
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Entry
CICLE_v10028917mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CICLE_v10028917mg
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cic01009
]
CICLE_v10028917mg
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10028917mg
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10028917mg
03041 Spliceosome [BR:
cic03041
]
CICLE_v10028917mg
Enzymes [BR:
cic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
CICLE_v10028917mg
Protein phosphatases and associated proteins [BR:
cic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
CICLE_v10028917mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CICLE_v10028917mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CICLE_v10028917mg
Spliceosome [BR:
cic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
CICLE_v10028917mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
18034236
NCBI-ProteinID:
XP_006424924
UniProt:
V4SM94
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
MEPAVLDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKI
CGDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL
RGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLI
NLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDM
DLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDK
KPRFS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgccgttttggacgacatcataagtcgtttattggatttcaaaaacggtagg
ggaggaggcggcaaacaagtgcagcttagcgaaagcgagatccgtatgctctgtacggtc
tccagagaaatctttcttcaacagcctaatcttcttgagcttgctgcccccatcaagatc
tgcggtgacattcatgggcaatactcagatcttttgaggctctttgaatatgggggtttc
cctcctaaggctaattatttattcctaggagactatgtggaccgtggcaagcagagtttg
gaaacaatatgtctcctgcttgcctataaaatcaagtaccctgagaacttttttctttta
agaggaaatcatgagtgtgcctctattaaccgaatttacggattttatgatgaatgtaaa
cgccggttcaatgtgagactgtggaaaatatttactgattgttttaactgccttcctgtg
gctgctctcatcgatgacaagatattgtgcatgcatggtggcctttcccctgacttaatt
aacttggatcaaattaggaagctacctcgtccaactgatgttccagattctggtttactt
tgtgatttactatggtcagatcctggccgagatgtcaagggttggggaatgaatgatcgg
ggagtctcatacacatttgggccagatacagtggcagagtttttgttgaagaatgatatg
gacctggtttgtcgcgcgcatcaggttgttgaggatgggtacgagttcttcgctgacaga
cagcttgttacgatattttctgctcccaactattgcggggaatttgataactctggtgca
atgatgagtgttgatgacagcttaatgtgctctttccagatccttaagcctacggataaa
aagccgaggttctcatga
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