Citrobacter sp. CRE-46: AN232_06745
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Entry
AN232_06745 CDS
T05520
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cie
Citrobacter sp. CRE-46
Pathway
cie03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cie00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AN232_06745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cie03021
]
AN232_06745
03400 DNA repair and recombination proteins [BR:
cie03400
]
AN232_06745
Enzymes [BR:
cie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AN232_06745
Transcription machinery [BR:
cie03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AN232_06745
DNA repair and recombination proteins [BR:
cie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AN232_06745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AWS94949
UniProt:
A0A2Z3X4P8
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All DBs
Position
1334709..1335698
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDDVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactttgggt
aacgcactgcgccgtattctgctctcatcgatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactacatgagtacagcaccaaagaaggcgttcaggaagatatcctggaa
atcctgctcaacctgaaagggctggcggtgagagttcagggtaaagatgacgttattctt
accttgaataaatctggcattggccctgtgactgcagccgacattacccatgatggtgat
gtcgaaatcgtcaagccacagcacgtgatctgccacctgaccgatgagaacgcatctatt
agtatgcgcatcaaagttcagcgcggtcgtggttatgtgccggcttctacccgaattcat
tcggaagaagatgagcgcccaatcggccgtctgctggtcgacgcatgctacagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaag
ctggtcatcgaaatggaaaccaacggcacaatcgatcctgaagaggcgattcgtcgtgcg
gcaaccattctggctgaacaactggaagcttttgttgacttacgtgatgtacgtcagccg
gaagttaaagaagagaaaccagaattcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcctcaaagcagaagctatccactatatcggtgat
ctggtacagcgtaccgaggttgagcttcttaagacgcctaaccttggtaaaaaatctctt
actgagattaaagacgtgctggcttcccgtggactgtctctgggcatgcgcctggaaaac
tggccaccggcaagcatcgctgacgagtaa
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