KEGG   Chryseobacterium sp. IHB B 17019: ATE47_13460Help
Entry
ATE47_13460       CDS       T04193                                 

Definition
(GenBank) 3'-phosphoesterase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
cih  Chryseobacterium sp. IHB B 17019
Pathway
cih03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cih00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    ATE47_13460
Enzymes [BR:cih01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     ATE47_13460
DNA repair and recombination proteins [BR:cih03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     ATE47_13460
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N
Motif
Other DBs
NCBI-ProteinID: ALR31463
UniProt: A0A0S3FUQ0
LinkDB All DBs
Position
2924585..2925187
Genome map
AA seq 200 aa AA seqDB search
MALKDYNAKRKFDETSEPKGKAKKSKDKLIFVIQRHAASRLHYDFRLEMEGVLKSWAVPK
GPSLDPKDKRLAMMVEDHPYDYKDFEGNIPEGNYGAGQVEIWDSGTYEPLDNDSKLSDEK
ELLKELHAGSLKFILYGKKLKGEFALVKMKNNEDNSWLLIKHKDEFAESNYDAEENTSPK
SLVTKFLEEKKSLKNAKKKS
NT seq 603 nt NT seq  +upstreamnt  +downstreamnt
atggctctcaaagattataacgcaaaaaggaaatttgacgaaacaagtgaacccaaggga
aaagcaaaaaagagtaaagacaagcttatttttgtgattcaaaggcatgcggcgtcacgc
cttcactatgattttcgtttggaaatggaaggcgttctgaaaagctgggctgttccaaaa
ggcccatcattggatccaaaagacaaacgcctggcgatgatggtagaagatcacccttac
gattacaaagattttgaaggaaacattcctgaaggaaattacggagccgggcaggtagaa
atctgggacagcggaacttatgagccattagataatgattcaaagctttccgatgaaaag
gaattgctgaaagaattacatgccggttcgttgaaatttattttatacggaaaaaaactg
aaaggagaatttgctttggttaaaatgaaaaataacgaagataattcgtggcttttaatt
aaacataaagatgaatttgcagaaagtaattatgatgcagaggaaaacacttcaccgaaa
tctttagttacaaaatttttagaggaaaaaaaaagcctaaaaaacgccaaaaagaaatcg
taa

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