Coccidioides immitis: CIMG_01511
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Entry
CIMG_01511 CDS
T01114
Name
(RefSeq) nucleoporin SONB
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cim
Coccidioides immitis
Pathway
cim03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CIMG_01511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_01511
03036 Chromosome and associated proteins [BR:
cim03036
]
CIMG_01511
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CIMG_01511
Chromosome and associated proteins [BR:
cim03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CIMG_01511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
4567589
NCBI-ProteinID:
XP_001247740
UniProt:
J3KJC7
LinkDB
All DBs
AA seq
1910 aa
AA seq
DB search
MSGFGAGSGFGGFGSGNQQQQSGGFGTGSAFGASGSGFGAPTAQTNPIFGGQNKGFGSTP
TSTGGMFGSGTSTFGNTGFGSGSSFGNTPSTGSSGMFGSNQTSGFGSGSQGSSLFGGGTT
GGTGFGGGSAFGSGTALAGAIPPASGTANPPFSAYEEKDSSGTCHYQSISCMQPYLKYSF
EELRVADYDQGRRYGNASGQAGAFGATAFGGFQQPAGGFGTQASSNPFGAASSAPSTFGQ
TATSGFGSGTSTNPLFGATKPAGSVFGQTPTSQPSGFGTTTTGTGGFGSTTGTAFGSGNL
LGNQQKTGFGTGTTGTGFGGFGQTAPTTSASPFGGTTATSSPFGQQQAGSGGFSAFGQTQ
QSQQNKPAFSGFGTTTQQQQPAGGTLFGGTPAGTGTTGFGTSLGQQGGTSLFGGTTGQQA
TSTNLFGGQQQQQQEQKPNLFGNLGTGTSTTGTSGFSGFGTQPQQQPGSSLFGGTQQQQK
PSLFTPSTGQTGSLFGTQASATPASTGGSLFNLGGANQNAQQQNTGGLGLGSLGSGSMFG
TPQQQTQQQPQATGLQASLLEGNPYGNQSIFSGLPAPNAPSPGPLATPLSASIKQKQRTP
LPMYKVSPHAANRLITPPTRQGYGFSYSTYGTPSSSIGTPTGTSLLSRSFNGGSLGRGFS
KSLSASSLRRSFEPETDSILSPGAFSPGSSRYSSSNLKRLTIDRSLRNDLFARAPQPPAT
ITNGDSTPQQSSKLKKRVSFDSPIDSEESSAKADGALVHVQSSTPEPTPEELGFLRSGKQ
KSTAAESNKVREVENVNGTPDGKSSASSSDQPEMEQIRGNELAIVPEDREQEEVVTPEKP
GLVKVPERDPQPGEYWMKPSRQEINKMTREQQKQVSNFTVGRKNCGSVTFNKPVDLTTVN
LDDVMDSIVVIGLRSITVYPEEGSKPPRGKGLNVPSTLTIENSWPRGRDKKAPSPLTSGP
LFDKHIERLKRVTNTEFVEYRKDKGIWIFKVPHFTTYGLDYDDDDEGESFDQSTMSAHPD
MVTPKAQIPSHHLGSEFNDSTISVDDSFDDSMIGVEDDTFEFKKRGLVPGAFTNQSVIGK
SVSFESDEEQESFLGEGSVGSNSENGYVEESDGHDTVTSELESDRDETMDMAGAFPVPDY
TAEQPTPISPQKSTFEHSRIGHMDDLSLNLSGNWAEQLQRTISPRKQDRQALREIQNSVF
ADRDGSDDTPKAKSQDSKDKGFATSIDLMNSLFRPRQASPRKSQVAKTREGFEWPYAKKP
KTFAGKPGDMPEDDVSFHSSFKPRWANLNTLILRGVASPSMLDAHEPEIILYKLGDMKEN
QDALLLQKARSVIQIIDDVPSASLSVADFLALIDVVQEESPEGELERRVWQLAYILFNDD
IEDDISAGVPEHFRKQYLHRIKKDRLSLLWEDIIRQTHGANVEASATAEERAIRYLCLHR
VEDACKALIEGGNPHLATLISQAGRDETIRKDMKDQIEFWRNQNVLSEMTEPIRALYELV
AGNCLRSEGKPNAAIEDRTSTFSISERFGLDWVQAFGLRLWYGIGESDSIEAAVSLFQHD
ISHGNEPAYPTSIFGDRREQPGADLPESPLWVILKIFAVAKYNGKHPEIQPICVPRDIMP
EAFSAQGLHSRLSFQLFHHICKVARQYNALEIDEHRADQLALNYAWELAASEEYGPALFV
LLYLNRAVDRERSIKEMLCQFAELLPAPVLEDETTSVMWKYLTQELRLPTPWIWAAKALF
ARSAGVTPTEVGCLLNARHWDEAHDTFCRVVAPRLVIERDYDTLKLLLDVFGKTPERRIR
GWPQEGGLYRDFLALVDVPGIRKDQAVLKRLTSTLINAGEKIEKSTTVPFEEKVALKEIG
RLVAGWCTNDIGSTLQPADILRLPMTQDARRIHAAEVSKRYYRAIMASGA
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcttcggcgctggctctggctttgggggcttcggctccggtaaccagcaacaa
caaagcggtgggttcggaactggatcagcttttggggcatcaggctcaggtttcggcgct
cctactgcacaaacaaaccccatttttggaggtcagaataaaggatttgggtccaccccg
acatccactggaggtatgtttggatcgggaacaagcacgttcggtaatacaggcttcgga
tcaggcagttcgttcggcaacactccaagtacagggagcagtggtatgtttgggagcaat
cagacatctggctttggaagcggcagtcagggtagcagtctctttggtggaggaactaca
ggcggaaccgggtttggcggtgggagtgcattcggtagcggaacagctttggctggcgcc
attcccccggcaagcggaaccgcaaatccaccgttcagcgcatatgaagaaaaagactct
tcggggacatgccattaccaaagcattagttgcatgcagccgtacttgaaatattccttc
gaggaacttcgcgttgcggattatgaccaaggacgcagatacggaaatgctagcggtcag
gccggagcatttggagcaactgccttcgggggtttccaacagcctgctggcgggtttggc
actcaagcttctagtaatccctttggtgcagcctcaagcgcgccttcaacttttggacag
acagcgacaagcggttttggaagtggtacttcaacaaacccattgtttggggctacgaag
ccagctggctcagtgttcggtcaaacccctacctcacagccaagcggtttcggcacaacc
acaactggcaccgggggatttgggtcaactacaggtacggcttttggttcaggtaatctc
ctcggcaatcagcaaaagacgggattcggcacgggcaccactgggactggatttggtgga
ttcggacaaaccgcacctaccactagtgcttcgccgtttggaggcactacagccacgtcc
tccccgtttggtcagcagcaagctggaagcggtggcttttcagccttcggtcaaacccaa
cagagccagcaaaataagccagcatttagtgggttcggaaccaccacgcaacagcaacag
ccggccggaggaaccctatttgggggaacgcctgcaggtaccggaactacagggtttgga
acaagcctcggacaacaaggtggcacatcgctgttcgggggtacgactggacagcaagcc
acatcaactaatttatttggcggtcagcagcaacaacagcaggaacagaagccgaatctg
tttggcaatcttgggaccggaacttcgaccacgggcaccagcggctttagtggatttgga
acccaacctcaacagcaaccgggatccagcttgtttggaggaacacaacaacagcaaaag
ccaagtctttttacccccagcacaggccaaactggtagcttgtttggtactcaagcaagt
gcaactcctgcctctactggtggctctttgttcaatctcggtggtgcgaatcagaacgca
caacagcaaaataccggtggattaggcttgggctcgttgggtagcggcagcatgttcgga
actccacagcaacaaacacaacagcagcctcaggctactggccttcaagcgtcgctcctg
gaaggcaatccttacggaaaccagtcaatcttctctggcctgcctgcaccgaatgctccc
tctccaggacccttagccacaccactgtccgcgagtatcaaacaaaagcaaagaacacca
ctgcctatgtataaagtttctcctcatgctgcaaaccgcctcatcacccctcccactcgc
caaggatacggattttcgtattctacatatggcactcctagcagctccattggtacaccg
actggaacgagcctgttaagtagaagttttaatggaggaagcttggggcggggcttcagc
aagagcctttcggcaagtagcttacgcagatccttcgagccagaaacggatagcatcctg
tccccgggagcattttctccgggaagctctcgatattcaagctcgaacttgaagcgcttg
acaatcgaccggagtcttagaaatgacctatttgcacgggcaccccagcccccggccaca
attacgaatggcgatagtactccacagcaatctagcaaactcaagaagagagtcagcttt
gattctcccattgatagcgaggaatcatctgcgaaagctgatggagctcttgtccacgtg
caaagctcaaccccggagccaacaccggaagaattgggcttcttgcggtcgggtaaacag
aagagcactgctgccgaatcgaataaagtgagagaggttgagaatgtcaatggcaccccc
gacggtaaatcttccgctagctccagcgaccagcctgagatggaacagatccgaggaaat
gaacttgccatcgtccctgaagaccgtgagcaagaagaagttgttacaccagagaagccc
ggactggtgaaagttccagagagagaccctcagcctggagaatattggatgaaaccatcc
cgccaagagatcaacaaaatgacgcgcgagcaacagaaacaggtatccaactttaccgtg
ggtcgcaaaaattgcggcagtgttacgtttaataagcctgttgacctcacaacggttaat
ctcgatgatgtgatggactcgatcgtcgtgatcggattacgttccatcactgtatatcct
gaggaaggatctaagccaccgcgaggcaaaggcttaaacgtcccgtccactttgacaatt
gaaaactcttggccacgaggtcgcgacaagaaggctccttcgccactgacgagtggacca
ctctttgataaacatatcgagcgtttgaagcgcgttacgaataccgaatttgtcgaatat
cggaaggataagggtatttggattttcaaagttccacactttaccacttacgggcttgat
tatgatgatgacgatgaaggtgagagttttgatcaaagcactatgagtgctcatcctgac
atggtcactccaaaggctcaaattccctcacatcatctcgggtcagaatttaatgattca
acaattagcgtcgatgattcgtttgacgactcaatgatcggagtcgaagacgatacgttc
gaattcaaaaaaagaggtttagttcctggagcctttacgaaccagtctgttattggtaaa
tctgtgtcctttgagtcggatgaagagcaagaatcttttttaggggagggctccgtgggt
tcgaattctgaaaatggatatgttgaagaaagtgacggtcatgacactgtcacatcagaa
cttgaatcagacagggacgagacgatggatatggctggtgcatttcctgtccctgactat
accgcggagcaacctactccaatcagcccccaaaaatcaactttcgaacactcgcgaatc
gggcatatggatgacttgagtttaaacttgagcggaaattgggcagagcagttgcagcgc
accatcagtcctcggaaacaagatcgacaagctctgcgcgaaatccaaaacagtgtcttt
gcggacagagacgggagtgatgacaccccaaaggcaaaatcccaagacagcaaggacaaa
ggatttgctacaagcatcgatcttatgaactcccttttccgaccgcggcaggccagtccg
cgaaagtctcaggtggcgaaaactcgggaaggattcgagtggccatatgccaagaagcct
aaaactttcgccggaaaacccggtgacatgccggaagatgatgttagcttccattcctcg
tttaaacccagatgggcaaatttgaatacacttattcttcgcggggttgcttcgccatca
atgcttgatgctcacgaaccagagattatactttacaagcttggagatatgaaggagaac
caagatgccttgctcttgcaaaaggctcgttcagttatacaaatcatcgatgacgtccca
tccgctagcttgtctgtcgctgatttccttgctttaatcgacgttgtccaggaagaatca
ccggaaggcgaactagaacgacgggtttggcaactagcatatatcctttttaatgatgat
attgaggatgatatatcggctggagtcccggagcacttccgcaagcaatatctccaccgc
atcaagaaagatcgcctcagtctactgtgggaggatatcatccgccaaactcatggtgcc
aatgttgaggctagtgcaactgcagaagaacgagcaatcagatatctctgcctccataga
gttgaagatgcgtgcaaggccctcatcgaaggtggaaacccccacttagcaacgctgatt
tctcaagctggacgagatgaaactattagaaaggacatgaaagaccaaattgagttctgg
cggaaccagaatgtactctctgaaatgactgagcctattcgtgcgctgtacgaactcgtt
gccggtaactgtcttcgtagcgagggcaaaccaaatgcagccatcgaggatcgaacatcg
actttcagtatctccgaacggtttggtctcgactgggtccaagcgtttggtctccgcttg
tggtatggtatcggcgaaagtgactctattgaagccgccgtgagtctgtttcaacatgat
atctcccatgggaacgagcctgcgtatccgacttcgatctttggggaccgtcgggagcag
ccaggggctgacttacctgaatctcctctgtgggttatcttgaaaatctttgcggttgcc
aaatataatggaaaacatcccgaaattcaaccaatctgcgtaccacgagatattatgcct
gaggccttttctgcccaggggttacatagccgactctcattccaactattccatcatatc
tgcaaggtcgcacgtcaatacaacgcacttgaaatcgatgagcatcgtgcagatcaactt
gctcttaattatgcctgggaacttgctgcttcggaggaatatggcccggcgttattcgtt
cttctatatctcaatcgtgccgtggatcgtgaacgtagtattaaagagatgttatgccaa
tttgctgagttgctccctgcaccagtcctagaagatgaaacaacgagtgttatgtggaaa
tatctcactcaggaactccgtcttccgaccccctggatctgggccgcgaaagcactcttt
gcacggtccgcaggtgtaacacctacagaggttgggtgtcttcttaatgctaggcattgg
gacgaagcccatgatacgttctgcagggttgttgctccgcggctcgtcattgagcgcgat
tacgatacacttaaattgttgctcgatgtatttggcaaaaccccagaaagaaggattcgt
gggtggccacaagaaggtggattgtatcgagatttcctggctttagtggatgttccaggg
attcggaaagaccaggctgtgttgaaaagactgaccagcacactgataaatgcgggtgaa
aaaatcgagaagagcacaacagtgcctttcgaggagaaagtggcgttaaaggaaattggt
cgattggtcgctgggtggtgcacgaatgacattggcagtactctgcagccggctgatata
cttcgccttccaatgacacaagacgcaagacgtattcatgccgcggaggttagcaagcga
tattatcgggcaattatggccagtggggcttga
DBGET
integrated database retrieval system