KEGG   Coccidioides immitis: CIMG_01511
Entry
CIMG_01511        CDS       T01114                                 
Name
(RefSeq) nucleoporin SONB
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
cim  Coccidioides immitis
Pathway
cim03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cim00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CIMG_01511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cim03019]
    CIMG_01511
   03036 Chromosome and associated proteins [BR:cim03036]
    CIMG_01511
Messenger RNA biogenesis [BR:cim03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CIMG_01511
Chromosome and associated proteins [BR:cim03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    CIMG_01511
SSDB
Motif
Pfam: Nup96 Nucleoporin2 Nup98_GLEBS
Other DBs
NCBI-GeneID: 4567589
NCBI-ProteinID: XP_001247740
UniProt: J3KJC7
LinkDB
AA seq 1910 aa
MSGFGAGSGFGGFGSGNQQQQSGGFGTGSAFGASGSGFGAPTAQTNPIFGGQNKGFGSTP
TSTGGMFGSGTSTFGNTGFGSGSSFGNTPSTGSSGMFGSNQTSGFGSGSQGSSLFGGGTT
GGTGFGGGSAFGSGTALAGAIPPASGTANPPFSAYEEKDSSGTCHYQSISCMQPYLKYSF
EELRVADYDQGRRYGNASGQAGAFGATAFGGFQQPAGGFGTQASSNPFGAASSAPSTFGQ
TATSGFGSGTSTNPLFGATKPAGSVFGQTPTSQPSGFGTTTTGTGGFGSTTGTAFGSGNL
LGNQQKTGFGTGTTGTGFGGFGQTAPTTSASPFGGTTATSSPFGQQQAGSGGFSAFGQTQ
QSQQNKPAFSGFGTTTQQQQPAGGTLFGGTPAGTGTTGFGTSLGQQGGTSLFGGTTGQQA
TSTNLFGGQQQQQQEQKPNLFGNLGTGTSTTGTSGFSGFGTQPQQQPGSSLFGGTQQQQK
PSLFTPSTGQTGSLFGTQASATPASTGGSLFNLGGANQNAQQQNTGGLGLGSLGSGSMFG
TPQQQTQQQPQATGLQASLLEGNPYGNQSIFSGLPAPNAPSPGPLATPLSASIKQKQRTP
LPMYKVSPHAANRLITPPTRQGYGFSYSTYGTPSSSIGTPTGTSLLSRSFNGGSLGRGFS
KSLSASSLRRSFEPETDSILSPGAFSPGSSRYSSSNLKRLTIDRSLRNDLFARAPQPPAT
ITNGDSTPQQSSKLKKRVSFDSPIDSEESSAKADGALVHVQSSTPEPTPEELGFLRSGKQ
KSTAAESNKVREVENVNGTPDGKSSASSSDQPEMEQIRGNELAIVPEDREQEEVVTPEKP
GLVKVPERDPQPGEYWMKPSRQEINKMTREQQKQVSNFTVGRKNCGSVTFNKPVDLTTVN
LDDVMDSIVVIGLRSITVYPEEGSKPPRGKGLNVPSTLTIENSWPRGRDKKAPSPLTSGP
LFDKHIERLKRVTNTEFVEYRKDKGIWIFKVPHFTTYGLDYDDDDEGESFDQSTMSAHPD
MVTPKAQIPSHHLGSEFNDSTISVDDSFDDSMIGVEDDTFEFKKRGLVPGAFTNQSVIGK
SVSFESDEEQESFLGEGSVGSNSENGYVEESDGHDTVTSELESDRDETMDMAGAFPVPDY
TAEQPTPISPQKSTFEHSRIGHMDDLSLNLSGNWAEQLQRTISPRKQDRQALREIQNSVF
ADRDGSDDTPKAKSQDSKDKGFATSIDLMNSLFRPRQASPRKSQVAKTREGFEWPYAKKP
KTFAGKPGDMPEDDVSFHSSFKPRWANLNTLILRGVASPSMLDAHEPEIILYKLGDMKEN
QDALLLQKARSVIQIIDDVPSASLSVADFLALIDVVQEESPEGELERRVWQLAYILFNDD
IEDDISAGVPEHFRKQYLHRIKKDRLSLLWEDIIRQTHGANVEASATAEERAIRYLCLHR
VEDACKALIEGGNPHLATLISQAGRDETIRKDMKDQIEFWRNQNVLSEMTEPIRALYELV
AGNCLRSEGKPNAAIEDRTSTFSISERFGLDWVQAFGLRLWYGIGESDSIEAAVSLFQHD
ISHGNEPAYPTSIFGDRREQPGADLPESPLWVILKIFAVAKYNGKHPEIQPICVPRDIMP
EAFSAQGLHSRLSFQLFHHICKVARQYNALEIDEHRADQLALNYAWELAASEEYGPALFV
LLYLNRAVDRERSIKEMLCQFAELLPAPVLEDETTSVMWKYLTQELRLPTPWIWAAKALF
ARSAGVTPTEVGCLLNARHWDEAHDTFCRVVAPRLVIERDYDTLKLLLDVFGKTPERRIR
GWPQEGGLYRDFLALVDVPGIRKDQAVLKRLTSTLINAGEKIEKSTTVPFEEKVALKEIG
RLVAGWCTNDIGSTLQPADILRLPMTQDARRIHAAEVSKRYYRAIMASGA
NT seq 5733 nt   +upstreamnt  +downstreamnt
atgtcaggcttcggcgctggctctggctttgggggcttcggctccggtaaccagcaacaa
caaagcggtgggttcggaactggatcagcttttggggcatcaggctcaggtttcggcgct
cctactgcacaaacaaaccccatttttggaggtcagaataaaggatttgggtccaccccg
acatccactggaggtatgtttggatcgggaacaagcacgttcggtaatacaggcttcgga
tcaggcagttcgttcggcaacactccaagtacagggagcagtggtatgtttgggagcaat
cagacatctggctttggaagcggcagtcagggtagcagtctctttggtggaggaactaca
ggcggaaccgggtttggcggtgggagtgcattcggtagcggaacagctttggctggcgcc
attcccccggcaagcggaaccgcaaatccaccgttcagcgcatatgaagaaaaagactct
tcggggacatgccattaccaaagcattagttgcatgcagccgtacttgaaatattccttc
gaggaacttcgcgttgcggattatgaccaaggacgcagatacggaaatgctagcggtcag
gccggagcatttggagcaactgccttcgggggtttccaacagcctgctggcgggtttggc
actcaagcttctagtaatccctttggtgcagcctcaagcgcgccttcaacttttggacag
acagcgacaagcggttttggaagtggtacttcaacaaacccattgtttggggctacgaag
ccagctggctcagtgttcggtcaaacccctacctcacagccaagcggtttcggcacaacc
acaactggcaccgggggatttgggtcaactacaggtacggcttttggttcaggtaatctc
ctcggcaatcagcaaaagacgggattcggcacgggcaccactgggactggatttggtgga
ttcggacaaaccgcacctaccactagtgcttcgccgtttggaggcactacagccacgtcc
tccccgtttggtcagcagcaagctggaagcggtggcttttcagccttcggtcaaacccaa
cagagccagcaaaataagccagcatttagtgggttcggaaccaccacgcaacagcaacag
ccggccggaggaaccctatttgggggaacgcctgcaggtaccggaactacagggtttgga
acaagcctcggacaacaaggtggcacatcgctgttcgggggtacgactggacagcaagcc
acatcaactaatttatttggcggtcagcagcaacaacagcaggaacagaagccgaatctg
tttggcaatcttgggaccggaacttcgaccacgggcaccagcggctttagtggatttgga
acccaacctcaacagcaaccgggatccagcttgtttggaggaacacaacaacagcaaaag
ccaagtctttttacccccagcacaggccaaactggtagcttgtttggtactcaagcaagt
gcaactcctgcctctactggtggctctttgttcaatctcggtggtgcgaatcagaacgca
caacagcaaaataccggtggattaggcttgggctcgttgggtagcggcagcatgttcgga
actccacagcaacaaacacaacagcagcctcaggctactggccttcaagcgtcgctcctg
gaaggcaatccttacggaaaccagtcaatcttctctggcctgcctgcaccgaatgctccc
tctccaggacccttagccacaccactgtccgcgagtatcaaacaaaagcaaagaacacca
ctgcctatgtataaagtttctcctcatgctgcaaaccgcctcatcacccctcccactcgc
caaggatacggattttcgtattctacatatggcactcctagcagctccattggtacaccg
actggaacgagcctgttaagtagaagttttaatggaggaagcttggggcggggcttcagc
aagagcctttcggcaagtagcttacgcagatccttcgagccagaaacggatagcatcctg
tccccgggagcattttctccgggaagctctcgatattcaagctcgaacttgaagcgcttg
acaatcgaccggagtcttagaaatgacctatttgcacgggcaccccagcccccggccaca
attacgaatggcgatagtactccacagcaatctagcaaactcaagaagagagtcagcttt
gattctcccattgatagcgaggaatcatctgcgaaagctgatggagctcttgtccacgtg
caaagctcaaccccggagccaacaccggaagaattgggcttcttgcggtcgggtaaacag
aagagcactgctgccgaatcgaataaagtgagagaggttgagaatgtcaatggcaccccc
gacggtaaatcttccgctagctccagcgaccagcctgagatggaacagatccgaggaaat
gaacttgccatcgtccctgaagaccgtgagcaagaagaagttgttacaccagagaagccc
ggactggtgaaagttccagagagagaccctcagcctggagaatattggatgaaaccatcc
cgccaagagatcaacaaaatgacgcgcgagcaacagaaacaggtatccaactttaccgtg
ggtcgcaaaaattgcggcagtgttacgtttaataagcctgttgacctcacaacggttaat
ctcgatgatgtgatggactcgatcgtcgtgatcggattacgttccatcactgtatatcct
gaggaaggatctaagccaccgcgaggcaaaggcttaaacgtcccgtccactttgacaatt
gaaaactcttggccacgaggtcgcgacaagaaggctccttcgccactgacgagtggacca
ctctttgataaacatatcgagcgtttgaagcgcgttacgaataccgaatttgtcgaatat
cggaaggataagggtatttggattttcaaagttccacactttaccacttacgggcttgat
tatgatgatgacgatgaaggtgagagttttgatcaaagcactatgagtgctcatcctgac
atggtcactccaaaggctcaaattccctcacatcatctcgggtcagaatttaatgattca
acaattagcgtcgatgattcgtttgacgactcaatgatcggagtcgaagacgatacgttc
gaattcaaaaaaagaggtttagttcctggagcctttacgaaccagtctgttattggtaaa
tctgtgtcctttgagtcggatgaagagcaagaatcttttttaggggagggctccgtgggt
tcgaattctgaaaatggatatgttgaagaaagtgacggtcatgacactgtcacatcagaa
cttgaatcagacagggacgagacgatggatatggctggtgcatttcctgtccctgactat
accgcggagcaacctactccaatcagcccccaaaaatcaactttcgaacactcgcgaatc
gggcatatggatgacttgagtttaaacttgagcggaaattgggcagagcagttgcagcgc
accatcagtcctcggaaacaagatcgacaagctctgcgcgaaatccaaaacagtgtcttt
gcggacagagacgggagtgatgacaccccaaaggcaaaatcccaagacagcaaggacaaa
ggatttgctacaagcatcgatcttatgaactcccttttccgaccgcggcaggccagtccg
cgaaagtctcaggtggcgaaaactcgggaaggattcgagtggccatatgccaagaagcct
aaaactttcgccggaaaacccggtgacatgccggaagatgatgttagcttccattcctcg
tttaaacccagatgggcaaatttgaatacacttattcttcgcggggttgcttcgccatca
atgcttgatgctcacgaaccagagattatactttacaagcttggagatatgaaggagaac
caagatgccttgctcttgcaaaaggctcgttcagttatacaaatcatcgatgacgtccca
tccgctagcttgtctgtcgctgatttccttgctttaatcgacgttgtccaggaagaatca
ccggaaggcgaactagaacgacgggtttggcaactagcatatatcctttttaatgatgat
attgaggatgatatatcggctggagtcccggagcacttccgcaagcaatatctccaccgc
atcaagaaagatcgcctcagtctactgtgggaggatatcatccgccaaactcatggtgcc
aatgttgaggctagtgcaactgcagaagaacgagcaatcagatatctctgcctccataga
gttgaagatgcgtgcaaggccctcatcgaaggtggaaacccccacttagcaacgctgatt
tctcaagctggacgagatgaaactattagaaaggacatgaaagaccaaattgagttctgg
cggaaccagaatgtactctctgaaatgactgagcctattcgtgcgctgtacgaactcgtt
gccggtaactgtcttcgtagcgagggcaaaccaaatgcagccatcgaggatcgaacatcg
actttcagtatctccgaacggtttggtctcgactgggtccaagcgtttggtctccgcttg
tggtatggtatcggcgaaagtgactctattgaagccgccgtgagtctgtttcaacatgat
atctcccatgggaacgagcctgcgtatccgacttcgatctttggggaccgtcgggagcag
ccaggggctgacttacctgaatctcctctgtgggttatcttgaaaatctttgcggttgcc
aaatataatggaaaacatcccgaaattcaaccaatctgcgtaccacgagatattatgcct
gaggccttttctgcccaggggttacatagccgactctcattccaactattccatcatatc
tgcaaggtcgcacgtcaatacaacgcacttgaaatcgatgagcatcgtgcagatcaactt
gctcttaattatgcctgggaacttgctgcttcggaggaatatggcccggcgttattcgtt
cttctatatctcaatcgtgccgtggatcgtgaacgtagtattaaagagatgttatgccaa
tttgctgagttgctccctgcaccagtcctagaagatgaaacaacgagtgttatgtggaaa
tatctcactcaggaactccgtcttccgaccccctggatctgggccgcgaaagcactcttt
gcacggtccgcaggtgtaacacctacagaggttgggtgtcttcttaatgctaggcattgg
gacgaagcccatgatacgttctgcagggttgttgctccgcggctcgtcattgagcgcgat
tacgatacacttaaattgttgctcgatgtatttggcaaaaccccagaaagaaggattcgt
gggtggccacaagaaggtggattgtatcgagatttcctggctttagtggatgttccaggg
attcggaaagaccaggctgtgttgaaaagactgaccagcacactgataaatgcgggtgaa
aaaatcgagaagagcacaacagtgcctttcgaggagaaagtggcgttaaaggaaattggt
cgattggtcgctgggtggtgcacgaatgacattggcagtactctgcagccggctgatata
cttcgccttccaatgacacaagacgcaagacgtattcatgccgcggaggttagcaagcga
tattatcgggcaattatggccagtggggcttga

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