Coccidioides immitis: CIMG_06694
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Entry
CIMG_06694 CDS
T01114
Name
(RefSeq) DEAD box helicase
KO
K11701
helicase required for RNAi-mediated heterochromatin assembly 1 [EC:
5.6.2.5
]
Organism
cim
Coccidioides immitis
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cim03036
]
CIMG_06694
Enzymes [BR:
cim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
CIMG_06694
Chromosome and associated proteins [BR:
cim03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
CIMG_06694
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
DEAD
ResIII
UvrD-helicase
PhoH
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
4561843
NCBI-ProteinID:
XP_001242798
UniProt:
A0A0E1RWW5
LinkDB
All DBs
AA seq
1108 aa
AA seq
DB search
MASRHFGLPHRGGTPTNVPASVPLNRSIGEYVKAASHVAESGSWTGKTEVPSSGEILGID
ADINPGDAVFLLPNQINGPWRSREMYLKAHYELLREDAVAPLRDAVAYVRQDPRMQDTLD
ICIYEKVRIVGITCAQSGIAIRVQFSIARAGKNIVWEYSQRLTTGKIVALTPANDNFKSR
CVVAVVAARPLEGLKSHPCQIDLFFANPDHAAFDYQQEWLMVESRNGYYEALRHTLLALQ
KMSKESFPLHEYICDLKHDVEPPEYVKRNPVIDASPLFPLANGVSHINMLREWPNPPKGL
DTSQWGALQHILTKRLSVVQGPPGTGKTHVSVVAIRTLLSNIGPKDPPIIIAAQTNHALD
QLLRHVSTFERNYVRVGGRSMDLEIRKRTVYELRKKYNIPFIPGGALGLARKQYRLLSDK
VAELIQPFTLDRSGMPLQAALFLKLELITQSQHDSLLRGAEGWIHSGDEIDPVSAWLGEQ
MIKYDPTYKMENFGFVEDEIDLEYEQLKELEAEQGLDDDDYENLRGHYIALKEGFTGRTN
LMLAGKTVSNQYLKYDDMWKIPARARGNVYSILQKRAKEIISEKLRSLMKEYNTTASNLK
IGKWERDLIILRDARVIGMTTTGLSKYRALVSSLKPRIILVEEAAEVIEAPVAAACVESL
EHLILVGDHKQLQGQCALKELEGDPFYLNISMFERLVHNGVEFKCLAKQRRMAPEIRRIL
TPIYDNLEDHEDVLNRPGVPGMGNVSSYFFCHSWPESSDSLLSKYNESEAKMVVGFYLYL
YMNGIPAEDITVLTFYNGQRKKILKALKEVPLLQGQYSKVATVDSYQGEENEIVLLSLVR
SGGRNIGFLSIENRVCVALSRAKRGFYIFGNAEALSIHNGLWWEIVQIMRKEPKRLGYYI
PVTCAGHDKKTLVRDPETWKKLDGGCLSPCGASLDCGHKCPLRCHAFPHKAVKCERPCLK
LLPCGHECKWKCFRPCECDCGIAHRSAIQPRVPQYPKNAAPLTSAEQMASVQHYRDFANG
GAKEADAQLALQTSRLAVNEKLRLADEQAYASLFGEVTTDVSTTGNPLMERVADTGGTSR
FRVVQFYSAAPTQVNGGSMKEEPSLLDL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcgccactttggcctgccccatcgaggcgggacaccgaccaatgtgccggcg
tcagtgccattaaataggagcattggagaatatgtcaaggctgccagccatgtcgcagaa
tccggctcctggacaggaaaaaccgaagttccatcatccggtgagattctaggcattgat
gccgatatcaaccctggcgatgctgtctttctcttgccaaaccagattaatggcccttgg
cgctctcgggagatgtaccttaaggcacattacgagcttctgcgtgaggacgcagttgct
cctcttcgcgatgcagttgcttatgtccgccaggaccctcgtatgcaggatactttggac
atttgcatttacgaaaaggtgcgaatcgtcggaataacatgcgcccagtcaggcattgct
atcagggttcaattttcaattgctcgagcaggcaagaatatcgtctgggaatattctcaa
agattgacaaccggtaaaattgttgcattgacccctgccaacgacaactttaaaagtcga
tgtgttgttgcagtagttgcagcaaggcctttggaaggtctcaagtcacacccatgccaa
attgaccttttcttcgccaacccagaccatgcagcgtttgattatcagcaagaatggctc
atggttgagtctcgcaacggatattacgaggcattaaggcatacacttctagcccttcag
aagatgagcaaggaaagctttccgcttcatgagtatatttgtgacctcaagcacgatgtg
gagccaccggaatacgtcaaacgtaaccctgtaattgatgcgtcaccgcttttccctctt
gcaaatggggtatcacatataaacatgctacgagagtggccaaatcctcccaaaggcctg
gacacatcgcaatggggagcattgcagcatattttaaccaagaggttgtcggttgtgcaa
gggcctccgggaactggcaagactcatgtttccgtcgtcgctatcagaacgctgctttca
aatataggcccaaaagacccaccaatcatcattgccgcacagacaaatcatgctcttgat
caactcctccgtcacgtctcaacctttgaacggaattatgtccgagttggcggaagaagc
atggacctcgagattcggaaacgaaccgtgtatgagctgaggaagaaatataacattcct
ttcattcctggcggagcattaggcctggcaagaaagcaatataggcttctatcggacaag
gttgcagaattaattcagccttttacgttggataggtcaggcatgccacttcaagccgcg
ctttttctcaagttagagcttatcacccaatcccaacacgattccctgcttagaggtgct
gagggctggattcactctggtgatgagatagaccccgtttctgcgtggctcggggagcag
atgatcaagtacgatccgacctataagatggaaaacttcggatttgtcgaagacgagatc
gatctcgaatatgaacagttgaaagagcttgaagccgagcaaggacttgacgacgacgat
tatgagaatctcagaggccactacatagctttaaaggaaggatttactggtcgcacgaac
ctcatgctcgccggaaaaacggtaagcaatcaatacttaaaatacgacgatatgtggaaa
atcccagcgcgtgcccgcggcaatgtctattcgattcttcagaaacgtgccaaggagatt
atcagcgagaaactgcggtccctcatgaaagaatataataccacagcttccaacctaaag
atcggcaaatgggaacgagatctgatcatcttacgagatgcgagggtgataggcatgaca
actaccggtctgagcaaatacagggcactcgtttcaagtctcaagcccagaattattttg
gtcgaagaagcagcagaggttatagaggcaccagttgcagcggcatgtgtggaaagccta
gagcatctcattctcgtcggcgatcataaacagctacaaggtcaatgtgccctcaaggag
ttggaaggtgacccattttaccttaacatttcgatgtttgaaagacttgttcataacggc
gtggaattcaaatgcttagccaaacaaagacgaatggcccccgaaatccgcaggattctc
acaccaatttatgataatctggaagaccatgaggatgttctcaatcgacctggtgttccc
gggatgggcaacgtgagctcgtatttcttctgccattcatggcccgagtcgtcggacagc
cttctgtccaaatataacgaaagcgaagccaaaatggtggtaggcttttacctatacctc
tatatgaacggaatacctgctgaggacatcactgttttgacattctataacggccagcgg
aaaaaaatcctcaaagctctaaaggaggttccactgctgcaaggacaatattccaaggtg
gctaccgttgattcttaccaaggggaagaaaatgagattgttctactttcacttgtgcgt
agcggcgggcgcaacatcgggttcctctccatcgagaaccgagtgtgcgttgccttgtca
cgagccaaacgcggcttctatattttcgggaatgcagaggccctctcaattcataatggt
ctttggtgggagattgttcagatcatgcgcaaggaaccaaagcggttagggtactacatt
cccgtaacttgtgctgggcacgacaagaaaactcttgtgagagacccagagacgtggaag
aagctagacggaggctgtttatccccttgcggggcttccttggattgcgggcataaatgt
cctcttcgttgtcacgccttcccgcacaaagctgtcaagtgtgagcggccgtgcctaaag
cttcttccttgcggtcacgaatgcaaatggaagtgcttccgcccctgtgagtgcgattgt
ggtatcgcacacagatcagccattcagccacgggtgccgcagtatccgaaaaatgcagct
ccacttacgagcgccgaacagatggcttctgtccagcactatcgagattttgccaatggg
ggtgcaaaggaagctgatgcgcagctagcactccagacgagccgattagctgtgaatgag
aaattgaggcttgcggatgagcaagcatacgcgtcattgttcggagaggtaaccaccgat
gtatccacgacaggaaaccctctgatggagcgcgttgcggataccggcggcacgtcgcgg
ttccgtgtcgtccagttctactctgctgcccctactcaagtgaatggcgggtcgatgaaa
gaagagcctagcctcctggacctttaa
DBGET
integrated database retrieval system
