Ciona intestinalis (yellow sea squirt): 100169672
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Entry
100169672 CDS
T01056
Symbol
ci-zf(c2h2)-42
Name
(RefSeq) zinc finger protein Ci-ZF(C2H2)-42
KO
K09203
early growth response protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
100169672 (ci-zf(c2h2)-42)
Transcription factors [BR:
cin03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
100169672 (ci-zf(c2h2)-42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-Di19
zinc-ribbons_6
BolA
Motif
Other DBs
NCBI-GeneID:
100169672
NCBI-ProteinID:
NP_001121590
Ensembl:
ENSCING00000022137
UniProt:
Q1RLI5
LinkDB
All DBs
AA seq
597 aa
AA seq
DB search
MLAYVSDNVALHSKIPEADPSWNIWDKNEENIWEFRQVSMQCNDDYDVTWPEEFSCFDNK
ESLCSNNCVEQDTDMKIEPVGVVSPTLPHAVDGSAGVDCEVLLETNITMDHTHNQCGDGK
NLPSYESAVMELPEYRERHFATKPHDIGEMSTLQYMPAHHQASFSYPYPSYAVVSPVPGK
DETSCLPPLLHHSMVQETFPPIISSPGFHPRSPDQKQERPFKSHLHATYSSPASLESARS
PQPQLETPIPYPTYFPQTSRSPNQLNPFYEAKGDTEDHYNYNPQPTVKIEPFSPPQQDYT
SSVTSVFPPLRSSPAMTQQELEYSEFVAQCNQSTPGPSYQADHGIVLNGEVHLRIQQTYL
PQSEVFHENYNRQQEQEFIPRSDEKYPPTFGSSHIQLSTPFVQPPPPYNDHNGGIPDHHF
QPSVFTPQFTPDARCRSQPTRGKGRSAKRPSRVLPQDRPYACPMQGCDKKFSRTDELNRH
VRIHTGVKPFTCPECQRRFSRSDHLRTHTRTHTGEKPYNCKICSKRFARSDECKRHTRIH
NKVKTKKLIMTSPKQRTVTSQVETMTTMTSHHPGYPSGSMTSLSVDNAMQQSCFTYQ
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgttggcttatgtgtcagataacgtggctttgcattcaaagataccggaggctgatcca
tcgtggaatatttgggacaaaaacgaagaaaatatttgggaatttcgccaagtctcgatg
caatgtaatgatgattatgacgtaacatggcccgaagaattctcttgtttcgataacaaa
gaatcattatgcagtaataattgcgtggagcaggatacagatatgaaaatagagccagtg
ggagttgtatcacctacgcttcctcatgcagtggatggaagtgccggcgtggattgtgag
gttttattggaaactaacatcaccatggatcatacacataatcaatgtggagatggaaaa
aatcttccaagttacgaatctgctgtgatggaactccctgaataccgggaacgtcatttc
gcgaccaagcctcacgatatcggcgagatgagcacattgcagtacatgccagcgcaccac
caagccagctttagttacccctacccaagctacgctgttgtatcaccggtcccaggcaag
gacgaaactagttgtttaccgcctctacttcaccactcgatggtgcaagaaactttcccg
ccgattatttcaagcccaggttttcatccaagaagtccagaccaaaaacaggagcgcccg
tttaaaagtcaccttcatgcaacttactcgtctcctgccagccttgagagcgcccgaagc
ccgcagccgcagttagaaaccccgatcccatacccgacatatttcccacaaacttcccga
tcgccgaaccaacttaatccattctacgaagcgaaaggcgacaccgaggatcattataac
tacaacccccaacctacagttaaaatagaaccgttctctccaccccagcaagattatacg
tcatcagtgacgtcagtgttcccaccattacgtagcagtccagctatgactcagcaggaa
ttagaatacagtgagtttgttgctcaatgtaaccaatcgactcctggcccaagctaccaa
gcagatcatggcattgtgttgaatggtgaggttcatcttcgtatccagcaaacctatctt
ccacaaagcgaagttttccacgagaattacaaccgacaacaggaacaagaattcattcca
agatcagacgaaaagtatccaccaacatttggatcaagccacatccaactgtcgactcct
tttgttcaacctcccccaccctacaatgatcacaatgggggaattcccgatcatcacttc
caaccgagtgtgtttactccccagttcacccctgacgctagatgtcgtagccagcctact
aggggtaaaggtagatcagccaaacgacctagtcgagtgttaccccaagatcgaccgtat
gcgtgcccaatgcaaggatgcgataaaaaattttcaagaaccgatgaattgaatcgccat
gttcgtattcataccggtgtgaaaccattcacgtgcccagaatgccaacgtagattctca
cgaagtgatcacttacgtacccatacccgcacccacaccggtgaaaaaccatataactgc
aagatttgcagcaaaagatttgcaagaagtgacgaatgcaaacgacatacaagaatccat
aacaaagttaaaacaaagaagctgattatgacgtcaccaaaacaaagaactgttacgtca
caagttgaaacaatgacaactatgacgtcacatcaccctggttacccaagtggttctatg
acgtcactatccgtagacaatgcgatgcagcaatcgtgtttcacttaccaatga
DBGET
integrated database retrieval system
