KEGG   Ciona intestinalis (yellow sea squirt): 100175226
Entry
100175226         CDS       T01056                                 
Name
(RefSeq) probable glutamate--tRNA ligase, mitochondrial
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin00860  Porphyrin metabolism
cin00970  Aminoacyl-tRNA biosynthesis
cin01100  Metabolic pathways
cin01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:cin00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    100175226
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    100175226
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cin01007]
    100175226
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cin03016]
    100175226
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cin02048]
    100175226
Enzymes [BR:cin01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     100175226
Amino acid related enzymes [BR:cin01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   100175226
Transfer RNA biogenesis [BR:cin03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    100175226
 Prokaryotic type
   Other AARSs
    100175226
Prokaryotic defense system [BR:cin02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    100175226
SSDB
Motif
Pfam: tRNA-synt_1c Anticodon_2
Other DBs
NCBI-GeneID: 100175226
NCBI-ProteinID: XP_002127194
Ensembl: ENSCING00000002621
LinkDB
Position
9:complement(4009122..4014759)
AA seq 538 aa
MLTYSITKRLCLSSGISSRHLRRLIHKEVRVRFAPSPTGFLHIGGLRTALYNYLFARANN
GKFIVRIEDTDQTRVVDGATSSILSTLEWAGLHPQESPEKGGEFGPYIQSERIKSYQAIA
NKLVDSGAAYRCFCSQRRLAILKKDQIKRKETGRYDNRCRELTDAEINSNLDQKVPYVIR
LRLKDEFHQIEDALFGKVSHNAHFEGDPVILKSDGFPTYHLANVVDDHMMQISHVIRGKE
WLTSTTKHVQIYEALGWEVPTFMHLPLLINKDGSKLSKRQGDVYVEESRAKGYSPCALLN
FMAYYGSGFPNINFPVCASNHYELLNILEQSFNPYRLVLSDAIVDFSKLDDFSTLLTKHK
FESSDKKVMQGVRKELYQLLEQKFEKELIFNQEEFTATEIDKYLNGILCSRKGHIVKLND
LIKEEYDYLWCRPQPLISEEDTMFHEFLYDFIRFLNTVTWEPLDVETIASYLNNHGREKG
LHYPKVMKFLRKLLSGREQGPKIVDLLLMLNKRESLLRLDIALSNIEREIEVEYLRKK
NT seq 1617 nt   +upstreamnt  +downstreamnt
atgttaacttatagcatcacaaagagattatgtctcagctccggcatttcatctcgccat
ttaagaagattaattcataaagaagttagagttaggtttgcgccatcacctacaggcttt
cttcatattgggggtcttcgaacagcgttatacaactacctttttgctcgagccaacaat
ggaaaattcatcgttagaattgaagacacagatcagacgagggtcgtcgatggagcaaca
tccagtattctatccacgctagaatgggcaggattacatccgcaggagagtccggaaaaa
ggaggagagtttggtccctacatccagagtgaaagaatcaaaagttatcaagcgatagca
aacaagctagtagacagtggagctgcttatcggtgtttttgttctcaaagaaggttggca
attttgaaaaaagatcaaatcaaaagaaaagaaactggaagatacgacaacagatgccga
gaattaacggatgcagaaattaattcaaatcttgatcaaaaagttccctatgtcatcaga
cttcgcttgaaagatgaatttcaccaaattgaggatgcattgtttgggaaagtcagtcat
aatgcacattttgagggggatccagttattttaaagtcagatgggtttcccacctaccat
cttgctaatgtagtagatgatcatatgatgcagatatctcatgtgatacggggaaaggaa
tggctgacatctaccacaaagcatgttcaaatatacgaagcgctcggctgggaagttccc
acctttatgcatcttcctttactcatcaataaagatggctcaaaactgtcaaaacgacaa
ggtgatgtttacgtggaagaatcaagagcaaaggggtattccccatgtgcgttactgaac
ttcatggcttactacggttcagggtttccaaatattaactttcctgtgtgtgcatcaaac
cactatgaactgctgaatattttggaacaatcatttaacccttacagacttgttctttct
gatgctattgtcgacttttcgaagcttgacgacttcagtacattgctcacaaaacataag
tttgaatctagtgataaaaaagtgatgcagggcgtcaggaaagagctgtaccaactctta
gagcagaaattcgaaaaagaactgatttttaaccaagaagaattcactgcaacagaaatt
gataaatatttaaatggaattctgtgcagtagaaagggtcacattgtaaagctgaatgat
ctaattaaagaagaatatgattatctttggtgtcgtccacaaccactaataagcgaggaa
gatacaatgtttcatgaatttctgtatgactttattaggttcttaaacactgtaacatgg
gaaccattggatgttgaaactattgcttcttatttaaacaatcatgggagggaaaagggc
ttgcactaccctaaagttatgaagtttctacgcaaattactgtctggaagagagcaaggg
ccaaagatagtggacttgctgctgatgctgaacaagagagaatcactgctgaggttggat
atagcactttctaacatagaacgagagatagaggtcgaatatttaagaaaaaaataa

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