Ciona intestinalis (yellow sea squirt): 100178322
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Entry
100178322 CDS
T01056
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38-like
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cin01002
]
100178322
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100178322
Enzymes [BR:
cin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100178322
Peptidases and inhibitors [BR:
cin01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100178322
Ubiquitin system [BR:
cin04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100178322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Cas_Cas6_C
SDA1_C
Motif
Other DBs
NCBI-GeneID:
100178322
NCBI-ProteinID:
XP_002124170
LinkDB
All DBs
Position
14:complement(3429896..3439227)
Genome browser
AA seq
934 aa
AA seq
DB search
MEQIISGIFLSDHSTKEKKKLFQVVLTSVKSKTESLTQEQQIRIFENCFNFFLSGDEFHS
RYAGNIITEYLPFCKEALDTMMSGKKAEEIVISDDNQNTQKNARTLMRRVKLTNILLTGT
LPESKSHRHFVLIMKSEVLRLMYDSKEHVSFAEICRLLIKHPTCMPPMNRNFPMCTLSIH
AMSDFVLLQEDVKNINNYIQDVRDVALLLNHIWTKAPNLLFPSLKEVFDILSNSNITAEP
SNALGCLVELIPCEVIDQAVKQITQDMTVQDTNMYLALNRMVSWLGWPTAQKTHLWILSF
FKHLAELNKFQMLIDVTLKSIGKVVACIRLPHVRPSAVAVLVHMLMSCQLSPDAFHIVVS
QIPKLLQFLEGENKPQENETYIKQLANLCYCMMHLHSGFPDLYDPLIHAISKHPKPSEEE
INGVLKCPTWSASYVSTYHYSYQVARRSTETNMAGLVNMGNTCFMNSIIQALYMAEEFRQ
LVLVKSREFPTTSISRYLEKTFAFLLKTKREAFQPTEMVEHSKPSWFSHGAQQDCSEYVK
YLLEALNEEFKEHSKGTKDSVAQAGTSATESPAAKVQKQSKEISISEFFHGRVKTLIKCS
TCKFVSTREEEFLDLALPLNKAYERETPSTGSGGCELGLKPEASNPQPSTSNQGRENTGS
PMDTEGATPFVGGEDCTVHGRAIQVEESIEENTEEDVISRNHDLDDLIHQNLVDETLDGS
NKYKCPICDDLRKAQKKTVFTKLPVYLMITLMRFTYNTKLQRRTKIMDHVNIPQEIEIPL
SNDNTEGYQKYKLWAVVVHSGTSAESGHYYCYGRKIYKESERWYLFNDSHVSFAPFSSIK
NLTGRYAVDTPYMLMYARCDRIAPTEGVEVVSEVLSAVIEDDNNKFEKEQKLASERATAS
SISNILGWNNDNDPPPPSCGGGDGTGIGGNRLVF
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaattatatcaggaatatttctttctgatcattctacaaaggagaaaaagaaa
ctgtttcaagttgttctgacctctgtgaaaagcaaaactgaatctttaacacaagagcag
cagattcgaatttttgaaaactgttttaatttttttctcagtggagatgaatttcacagc
agatatgctggcaatattatcacggaatatttacctttttgtaaagaagcattggatact
atgatgagtggaaaaaaagcggaggaaattgtaatttctgatgataatcaaaatacgcag
aaaaatgccagaactttaatgcggcgcgtgaaattaactaatattttactaactggtacg
ctaccggagtcaaaatctcatcggcattttgttttaattatgaagagtgaagttttacga
ctgatgtacgatagcaaggagcatgtcagctttgctgagatctgccgacttcttataaag
caccccacttgtatgcctccaatgaacagaaattttcctatgtgtactttatcaattcac
gctatgagtgactttgtcttattacaagaagatgtgaaaaacataaacaactatatccaa
gatgtgcgtgatgtggcattgttattgaaccatatttggacaaaagctccaaacctccta
tttccgtcactaaaagaagtttttgatattctgtcaaatagtaacatcactgctgaacct
tcaaatgcattaggttgcttggtggagctcataccatgtgaagtaattgatcaagctgtg
aaacaaatcacacaagacatgacagtccaggacaccaatatgtatctagcacttaaccgt
atggtttcttggcttggctggccaacagcacagaaaactcatctttggattttatctttt
tttaaacacttagcggaactaaataagtttcaaatgctgatagatgtcactctaaaatca
attggaaaagttgtagcttgtataagacttcctcatgttcgaccgtcagcagttgctgtg
cttgttcatatgttaatgagttgccaactttcacctgatgcatttcatattgtagtttca
caaattccaaagcttttacagtttttagaaggcgaaaataaaccacaagaaaatgaaaca
tatattaaacaacttgccaacttatgctactgtatgatgcatctacattctggttttcca
gatttatatgatccacttattcatgcaataagtaaacaccccaaaccaagtgaagaagaa
atcaatggggttttaaaatgcccgacgtggtccgcttcttacgtttccacgtaccattat
tcatatcaagtcgcacgacgctcgaccgagaccaacatggcaggcctcgtaaacatgggc
aacacatgttttatgaacagcattatacaagcattgtacatggcagaagagtttcgtcaa
ttggtacttgtaaaatcgcgtgaattccctactacctcaatatcaagatatcttgaaaaa
actttcgcttttcttttgaaaacgaaacgtgaagccttccaaccaacggagatggtcgaa
cattcaaaaccttcatggttttcccatggcgctcaacaggattgttctgagtatgttaaa
tatttgctagaagcattgaatgaggaattcaaggaacactcgaaagggactaaagattct
gttgcacaagctggaacatctgcaacagaaagcccagcagctaaagtgcagaaacaaagc
aaagaaatatcaatatctgagtttttccatggaagagttaaaactttaataaaatgttca
acttgtaaattcgtttcaacaagagaagaagaatttcttgaccttgcgttacccctaaat
aaagcctatgaaagggaaacaccctcaactgggtcagggggttgcgagttggggttaaaa
ccggaagcttcaaacccccaacccagcacctctaatcaggggcgagaaaatacaggttca
cccatggatactgaaggagctacaccatttgtgggtggtgaagattgtactgtgcatggt
agggctatacaggtggaggaatcaatagaagaaaacacagaagaagatgttatctcaagg
aatcatgatctggatgatcttattcatcaaaatcttgtggatgaaaccttggacggaagt
aataaatataaatgcccaatatgtgatgatttaagaaaagcacaaaagaaaactgtcttt
acaaaattacctgtttatttgatgattactttgatgagatttacctacaatacaaaactg
cagagaagaactaaaattatggatcatgttaatataccacaagaaattgaaatacctctc
tctaatgataatactgaaggatatcaaaaatataaactttgggcagtagtcgtgcattct
ggcacctcagcagaaagcgggcattactattgttatggtcgtaaaatctacaaagaatca
gaacgttggtatcttttcaatgacagtcatgtttcttttgccccctttagcagtataaag
aatttgaccgggcggtatgctgtagatacgccatatatgttaatgtacgctcgctgtgat
agaatagctcctacagaaggggtagaagttgtaagcgaagttctatcagcggtaattgaa
gatgataataataaatttgaaaaggagcaaaaattagcatctgagcgagctacagcttct
tctatttccaatattctcggctggaacaatgataatgacccaccacccccctcgtgtggt
ggtggtgacggtacaggcataggtggaaatcgtctcgtattttag
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