KEGG   Ciona intestinalis (yellow sea squirt): 100178764
Entry
100178764         CDS       T01056                                 
Name
(RefSeq) thrombospondin-DD
Organism
cin  Ciona intestinalis (yellow sea squirt)
SSDB
Motif
Pfam: TSP_C TSP_3 F5_F8_type_C EGF_CA cEGF EGF_3 Ephrin_rec_like EGF KCNQC3-Ank-G_bd
Other DBs
NCBI-GeneID: 100178764
NCBI-ProteinID: NP_001265897
Ensembl: ENSCING00000009058
UniProt: E0XJK1
LinkDB
Position
3:4555145..4580030
AA seq 992 aa
MRIAAISTQGAPEFNFFITKYMLSYSSDGITWVNYVPDQPFLSNDTTSTTSSTQYGTTVT
TPYSNTSNYTAQPTTPSPFPFLPITMAMVSSVNSTVINDSILLPGNNDSNSIAKNMLSPE
ILARYVRLLPAGWVGGIGLRMEMYGCNEEIRLRENSKCYRCPSSYYCPGDGRKLPCGRCA
DFATVGSHNIDSLNSVYNETCGRSPTEFSFGAKAECSTCLKGYVCSNGLATSCPTLTYTA
GCNDTMCSPCTVCEPGHSCTSGTKKPCEPGSYSNANTPGVCIDCKAGTYSDTHGSTSCKT
CTSGSQSCIGASFCQPCIAQEWSPDGADRCQGCHKDCPCLSSPCFRSVQCVNIRHASNQT
WSFKCYDCPKGFTGDGETCSDIDECMLSNPCVDQTQCVNTYGGFYCNGCPSGYHSDPYFG
FGLEDTKTIQICNDINECDESGTCDPLVQCNNTMGNYTCGQCLLGFTGTGYTKCHEPDAC
IPISVRRGCDIIASCDPVSNHNAVCECPPGFAGPGSACGVDNDSDGQPDLFIPCGDYVAC
AEDNCIGIPNSGQEDADGDRRGDDCDQDDDNDFIPDHLDNCPLVPNYNPTGNQVDSDGDG
YGDACDTCPYLFGQFADTDGDGLGDGCDTDSDNDGEADTTDLCPLDKNVTTSPDKDNDGV
GDPCDNCVFRSNSGQSDKNQNRVGDACDDGKDADGDSVLTFLDNCPYVPNPSQSDWDGDG
VGDACDDDADNDGKPDDVDHCPFTVDTNVEDDSPCKDDYDGDGILDVDDTCIADPTISST
TLLPYMEVNLHTGSPLPQWKVTHKGKSVSQPNSTPFPAMLIGDQRYGSMDYTGSFFVNEN
PSAGNYVGFVFCYQNNKHFYVVMWMNEHNSEDQNARKTGLKGLQIKVVDSNTGPHINLAD
AIWHTSDTTNQVDLIYHEPTLIGWEAKTPYLFTIQHRPSVGSIHVVITHLDKLIVDTGPV
YDTKYTGGRVGILSFRQPNVIWSQLKVKCTKR
NT seq 2979 nt   +upstreamnt  +downstreamnt
atgagaatcgcagccatttcaacacagggagctccagagtttaactttttcattacaaag
tatatgttaagctacagtagtgacggcattacttgggttaattacgtaccagatcaaccc
ttcctatcaaatgacaccacaagcacaacaagttctacgcaatatggaaccacagtaaca
acaccttactccaacacaagcaactacactgcccagccaaccaccccttccccattccca
tttctcccaattacaatggctatggtttcttcagtaaacagcactgttataaatgatagc
atcctgttacctggaaacaatgattccaacagcatagcaaagaacatgctaagtcctgaa
atactggcaagatatgtgaggttattaccagcaggttgggttggtggaattggactcaga
atggagatgtatggatgtaatgaagagataagactgagagaaaacagcaaatgttacaga
tgtccatcgtcatactactgtcctggggatggtaggaagctaccttgtggtcggtgtgct
gactttgcaacagttggatctcacaacatagattcattgaattctgtttataacgaaact
tgtggacgttctcctactgagttttcatttggagcaaaagcagaatgttcaacatgcttg
aagggatatgtttgcagcaatggcttagcaacctcatgccccactttaacatacactgct
ggttgcaatgacaccatgtgctctccgtgcactgtgtgcgaacctgggcactcatgcaca
agtggcacgaaaaaaccttgtgagcccggttcctattcaaatgcaaatacaccaggtgtt
tgtattgactgtaaagcaggcacatatagtgacactcatggttctacatcatgcaagaca
tgcacttcaggctcccaaagttgtattggagcaagtttttgtcagccatgcattgcacaa
gagtggtcaccagatggggctgataggtgccagggatgccataaagattgtccatgcctc
agttcaccgtgcttccgcagtgtacagtgtgttaatataagacatgcttcaaaccagaca
tggagtttcaaatgttacgattgccccaaaggcttcactggagatggagagacatgcagt
gacattgatgagtgcatgctttcaaatccatgtgtggaccaaacacaatgcgtgaacaca
tatggaggcttctactgcaatggctgcccatctggttaccatagcgacccttactttggg
tttggacttgaggacaccaagacaatccagatatgcaatgatataaatgaatgtgatgaa
tcagggacttgtgatccgttggtgcagtgcaacaacactatgggcaattacacatgtggg
cagtgtctccttggattcacagggaccgggtacaccaagtgtcatgaacctgatgcatgt
attccaatcagtgtgagaaggggttgtgatattattgcttcatgtgacccggtcagcaac
cataatgctgtttgtgagtgtccgcctgggttcgccgggcccggcagtgcatgtggggtc
gacaacgattccgacgggcaacctgatctgttcattccctgtggtgattatgttgcatgc
gcggaggataattgtatcgggatccctaacagtggtcaggaggacgcagatggagacagg
aggggagatgattgtgatcaagatgatgataatgatttcatcccggatcatttggataac
tgtccacttgtccccaattacaatccaactggaaaccaagtggattccgatggtgatggg
tacggtgacgcatgcgatacttgtccctatctgttcgggcaattcgctgacacagatgga
gatggcttgggtgacggttgtgacactgactctgacaacgatggcgaagcagacactact
gatctttgccctctggataagaacgttactacctcaccagataaagataatgatggagtg
ggtgatccgtgcgataactgcgtttttagatccaattccgggcaatctgataaaaaccag
aaccgtgttggggacgcttgcgatgacgggaaagatgctgacggtgacagtgtccttaca
ttccttgacaactgcccttatgttcccaacccctcacaatcggactgggatggggacgga
gtgggtgacgcatgcgatgatgatgcagacaacgatgggaaacctgatgatgttgatcat
tgtccgttcactgtggataccaatgttgaagatgattccccatgcaaagatgactatgat
ggagacgggattttggatgtggatgatacttgcatcgctgatcctacgatctcatcaacc
actctacttccttatatggaagttaatcttcacactggttcaccacttccacaatggaaa
gtcacacacaagggtaagtcggtgtcccaaccaaactcaactccttttcctgcaatgctg
attggtgatcagcgttacggttcaatggattacactgggagctttttcgtcaatgaaaac
ccaagtgcgggaaactatgttgggtttgtgttttgttaccaaaacaacaaacatttttat
gtcgtaatgtggatgaatgaacacaacagcgaagatcaaaatgcgagaaaaactggactc
aagggattacagataaaggttgtagattctaacacaggcccccacattaaccttgctgac
gcaatatggcatacatcggatacaactaaccaggttgacctcatataccatgaacctaca
ttgataggttgggaagctaaaactccttatctcttcactattcagcacagaccatcagtt
ggtagcatccatgttgtgataacccaccttgacaagctaatagttgacacaggacctgtg
tatgatacaaagtataccggtggccgagttgggattctatcatttcgtcaacccaatgtt
atttggtcccaacttaaagtgaaatgcactaaacggtga

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