Ciona intestinalis (yellow sea squirt): 100179620
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Entry
100179620 CDS
T01056
Symbol
nachr
Name
(RefSeq) nicotinic acetylcholine receptor subunit precursor
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100179620 (nachr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cin04040
]
100179620 (nachr)
Ion channels [BR:
cin04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
100179620 (nachr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
Motif
Other DBs
NCBI-GeneID:
100179620
NCBI-ProteinID:
NP_001191093
Ensembl:
ENSCING00000022006
UniProt:
E7FIZ2
LinkDB
All DBs
AA seq
783 aa
AA seq
DB search
MDFSFLKLVQWKSLCILACLHIGNTDASKTDEKLSQFLFSNYNKHIRPARTLGDVTNVTF
YLTLLQLISVTEKSEEMTTSQYVTIRWEDPRLIWNPKDFGGVTQIRLPSQLFWKPDLVLY
NNNDGEYDTTVPVNALLNHTGMVEWLPAAIYKSACKIKVDLFPFDWQNCTMKFRSFTYDK
TELYITSAYNKVVVDKAAYRDNGEWTIIHCPIKTNEDVNDPSYQDISLYFIIQRKPLFYI
INIIIPCVLISSLSVLVFYLPSGSSEKMTMSISVLLGLTVYLLLLAKRVPETSLGVPLIG
AYLLFTMLTVTLSIIFSVVVLNIYHRTPSTSEMPEWVRSLFMGTLPDLLRMEKPLSTRRL
LLQTERRKLDDPIVSKNPYTHIARQTERDALLTDAYVEQAIPTAEQNLIILEEYKRNQQL
VSSISRRSQHLRSRRTNKANDFQQYLSQSSLRSVNGRKTEKNRRHRKQRQSCHDDRSWKY
HGDDLNTTQFLQENIPMNLSEDGWGKEPIVCPEKYLPRSKSCSFDSKKHCAYIKEYQNHG
DIATSLPLLGDSLQNNYDQLKEDQGNANPVQDSFENEELYLYKTHNEKIWCSKPRRTDLK
GQTRIRNRPRPFQNLRSPHLKPRENGYHSHNTKHTSGDINSPNVTTYESLFIDEEEQDSH
YNTPTSTGAANCFESVEFVTNECKSVGKLSEEALLAASAVDFIAENMKTTDKMKIMIEDW
HFVATVVDRLLLWIFMLVFLAGTLYFFIKATLNAPPQHPFEDNDPKYAMCWKTDEHHKYH
LLE
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggatttctcgtttttaaaacttgtacagtggaaaagtttatgtattttagcgtgcctt
cacatcggaaacaccgatgcttcaaaaacagatgaaaaactgtcgcaatttcttttttcc
aactacaataagcacatccgaccagctcggactcttggtgacgtaaccaatgtgacgttt
tatctcaccttgttacaactgatcagcgtgactgagaaatctgaagaaatgacaacttct
caatacgtcacaattcgttgggaagatccccgtttaatctggaatccgaaagattttgga
ggagtgacgcagattcgacttccttctcaactattttggaagccagacctggtgctttat
aacaataacgacggagaatacgacacaactgtaccggtaaacgcattgctaaaccatact
ggtatggttgaatggctacctgctgcgatttacaaaagtgcttgcaaaattaaagtggat
ttatttccttttgactggcagaactgtaccatgaaatttcgaagtttcacttacgacaaa
accgagttatacattactagtgcttacaacaaggtggttgtggacaaagcagcatatcgt
gacaacggcgagtggacaataattcattgtccgataaaaacaaacgaagatgttaatgat
ccaagttatcaagacatctctctgtacttcattattcagcggaagccattattctacatt
attaacattattataccatgtgtcctgatttcttctctctcggtcctcgtgttctacctt
ccaagtggttcaagcgaaaaaatgacaatgagcatttctgtattattaggtcttactgtt
tatttacttttactggccaagcgggttccagaaacatctctcggtgtgccattaatcggg
gcctatctactgtttacaatgttgactgtcacattatcaattattttcagtgttgtagtt
cttaatatctatcatcgtactccatcaacttctgagatgcctgaatgggttcgttcactt
ttcatggggacactaccagatttgttaaggatggaaaaaccgcttagcactcgccgcctt
ctcctgcaaactgaacgacgaaaacttgatgatcctatagtctcaaagaatccttataca
catattgcgcgacaaaccgaaagagatgcactcttaacggacgcatatgttgaacaggca
attccgacagcagaacaaaacctaatcattttggaagaatacaaacgcaaccaacaattg
gtttcgtccatcagtagacggtctcaacatctgcgttccagacgaactaacaaagctaat
gattttcagcaatatttatcgcaaagctcgttaaggtcggtaaacggtcggaaaacagaa
aagaatcgacgacatcgtaaacaacgtcaaagctgtcatgacgaccgaagctggaaatac
catggggacgatttaaatacaacacaatttctacaggaaaacatacctatgaacttatcg
gaagatggctgggggaaagagccgatcgtgtgtccagaaaaatacttacctcgttcaaag
tcatgttctttcgattctaaaaaacattgtgcatacataaaggaatatcaaaatcatggt
gacattgctacttctttaccactactaggtgattcacttcaaaataattatgatcaactc
aaagaagatcaaggaaatgcaaaccccgttcaggacagttttgaaaacgaagagttgtat
ttatataaaacccacaacgagaagatttggtgcagtaaaccacgtagaacagatcttaaa
ggacaaactagaatacgtaatcggccaagaccgtttcaaaatctgcgttctcctcatttg
aagccacgagaaaatggttaccactcgcacaacacaaaacatacttctggtgatataaat
tcgccaaatgtaacgacgtatgaatcactattcattgacgaagaagagcaagattcacat
tataacacgccaacttctacaggcgcggcaaattgctttgagtctgtagaatttgtgacg
aacgaatgtaaaagcgttggaaaattatctgaggaagctcttcttgctgccagcgctgtg
gactttattgctgaaaatatgaaaactacagataaaatgaagataatgatagaagattgg
catttcgttgcaaccgttgttgaccgcttgctcctatggatatttatgttggttttcctt
gcgggtactttatacttctttataaaggcaacgttgaacgccccacctcaacatccattt
gaagacaacgatcccaaatacgcaatgtgctggaaaacagatgaacaccacaaataccac
ttgttagaatag
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