KEGG   Ciona intestinalis (yellow sea squirt): 100179620
Entry
100179620         CDS       T01056                                 
Symbol
nachr
Name
(RefSeq) nicotinic acetylcholine receptor subunit precursor
  KO
K04813  nicotinic acetylcholine receptor beta-2
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:cin00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    100179620 (nachr)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cin04040]
    100179620 (nachr)
Ion channels [BR:cin04040]
 Ligand-gated channels
  Acetylcholine (nicotinic)
   100179620 (nachr)
SSDB
Motif
Pfam: Neur_chan_memb Neur_chan_LBD DUF2417
Other DBs
NCBI-GeneID: 100179620
NCBI-ProteinID: NP_001191093
Ensembl: ENSCING00000022006
UniProt: E7FIZ2
LinkDB
AA seq 783 aa
MDFSFLKLVQWKSLCILACLHIGNTDASKTDEKLSQFLFSNYNKHIRPARTLGDVTNVTF
YLTLLQLISVTEKSEEMTTSQYVTIRWEDPRLIWNPKDFGGVTQIRLPSQLFWKPDLVLY
NNNDGEYDTTVPVNALLNHTGMVEWLPAAIYKSACKIKVDLFPFDWQNCTMKFRSFTYDK
TELYITSAYNKVVVDKAAYRDNGEWTIIHCPIKTNEDVNDPSYQDISLYFIIQRKPLFYI
INIIIPCVLISSLSVLVFYLPSGSSEKMTMSISVLLGLTVYLLLLAKRVPETSLGVPLIG
AYLLFTMLTVTLSIIFSVVVLNIYHRTPSTSEMPEWVRSLFMGTLPDLLRMEKPLSTRRL
LLQTERRKLDDPIVSKNPYTHIARQTERDALLTDAYVEQAIPTAEQNLIILEEYKRNQQL
VSSISRRSQHLRSRRTNKANDFQQYLSQSSLRSVNGRKTEKNRRHRKQRQSCHDDRSWKY
HGDDLNTTQFLQENIPMNLSEDGWGKEPIVCPEKYLPRSKSCSFDSKKHCAYIKEYQNHG
DIATSLPLLGDSLQNNYDQLKEDQGNANPVQDSFENEELYLYKTHNEKIWCSKPRRTDLK
GQTRIRNRPRPFQNLRSPHLKPRENGYHSHNTKHTSGDINSPNVTTYESLFIDEEEQDSH
YNTPTSTGAANCFESVEFVTNECKSVGKLSEEALLAASAVDFIAENMKTTDKMKIMIEDW
HFVATVVDRLLLWIFMLVFLAGTLYFFIKATLNAPPQHPFEDNDPKYAMCWKTDEHHKYH
LLE
NT seq 2352 nt   +upstreamnt  +downstreamnt
atggatttctcgtttttaaaacttgtacagtggaaaagtttatgtattttagcgtgcctt
cacatcggaaacaccgatgcttcaaaaacagatgaaaaactgtcgcaatttcttttttcc
aactacaataagcacatccgaccagctcggactcttggtgacgtaaccaatgtgacgttt
tatctcaccttgttacaactgatcagcgtgactgagaaatctgaagaaatgacaacttct
caatacgtcacaattcgttgggaagatccccgtttaatctggaatccgaaagattttgga
ggagtgacgcagattcgacttccttctcaactattttggaagccagacctggtgctttat
aacaataacgacggagaatacgacacaactgtaccggtaaacgcattgctaaaccatact
ggtatggttgaatggctacctgctgcgatttacaaaagtgcttgcaaaattaaagtggat
ttatttccttttgactggcagaactgtaccatgaaatttcgaagtttcacttacgacaaa
accgagttatacattactagtgcttacaacaaggtggttgtggacaaagcagcatatcgt
gacaacggcgagtggacaataattcattgtccgataaaaacaaacgaagatgttaatgat
ccaagttatcaagacatctctctgtacttcattattcagcggaagccattattctacatt
attaacattattataccatgtgtcctgatttcttctctctcggtcctcgtgttctacctt
ccaagtggttcaagcgaaaaaatgacaatgagcatttctgtattattaggtcttactgtt
tatttacttttactggccaagcgggttccagaaacatctctcggtgtgccattaatcggg
gcctatctactgtttacaatgttgactgtcacattatcaattattttcagtgttgtagtt
cttaatatctatcatcgtactccatcaacttctgagatgcctgaatgggttcgttcactt
ttcatggggacactaccagatttgttaaggatggaaaaaccgcttagcactcgccgcctt
ctcctgcaaactgaacgacgaaaacttgatgatcctatagtctcaaagaatccttataca
catattgcgcgacaaaccgaaagagatgcactcttaacggacgcatatgttgaacaggca
attccgacagcagaacaaaacctaatcattttggaagaatacaaacgcaaccaacaattg
gtttcgtccatcagtagacggtctcaacatctgcgttccagacgaactaacaaagctaat
gattttcagcaatatttatcgcaaagctcgttaaggtcggtaaacggtcggaaaacagaa
aagaatcgacgacatcgtaaacaacgtcaaagctgtcatgacgaccgaagctggaaatac
catggggacgatttaaatacaacacaatttctacaggaaaacatacctatgaacttatcg
gaagatggctgggggaaagagccgatcgtgtgtccagaaaaatacttacctcgttcaaag
tcatgttctttcgattctaaaaaacattgtgcatacataaaggaatatcaaaatcatggt
gacattgctacttctttaccactactaggtgattcacttcaaaataattatgatcaactc
aaagaagatcaaggaaatgcaaaccccgttcaggacagttttgaaaacgaagagttgtat
ttatataaaacccacaacgagaagatttggtgcagtaaaccacgtagaacagatcttaaa
ggacaaactagaatacgtaatcggccaagaccgtttcaaaatctgcgttctcctcatttg
aagccacgagaaaatggttaccactcgcacaacacaaaacatacttctggtgatataaat
tcgccaaatgtaacgacgtatgaatcactattcattgacgaagaagagcaagattcacat
tataacacgccaacttctacaggcgcggcaaattgctttgagtctgtagaatttgtgacg
aacgaatgtaaaagcgttggaaaattatctgaggaagctcttcttgctgccagcgctgtg
gactttattgctgaaaatatgaaaactacagataaaatgaagataatgatagaagattgg
catttcgttgcaaccgttgttgaccgcttgctcctatggatatttatgttggttttcctt
gcgggtactttatacttctttataaaggcaacgttgaacgccccacctcaacatccattt
gaagacaacgatcccaaatacgcaatgtgctggaaaacagatgaacaccacaaataccac
ttgttagaatag

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