KEGG   Ciona intestinalis (yellow sea squirt): 100179924
Entry
100179924         CDS       T01056                                 
Name
(RefSeq) sarcosine dehydrogenase, mitochondrial-like isoform X1
  KO
K00314  sarcosine dehydrogenase [EC:1.5.8.3]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin00260  Glycine, serine and threonine metabolism
cin01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cin00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    100179924
Enzymes [BR:cin01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.8  With a flavin or flavoprotein as acceptor
    1.5.8.3  sarcosine dehydrogenase
     100179924
SSDB
Motif
Pfam: DAO GCV_T FAO_M GCV_T_C FAD_binding_2 Thi4 Pyr_redox_2 Pyr_redox_3 NAD_binding_8 FAD_binding_3 Pyr_redox FAD_oxidored ThiF ApbA Lycopene_cycl GIDA AlaDh_PNT_C Shikimate_DH T9SS_plug_1st NAD_binding_9
Other DBs
NCBI-GeneID: 100179924
NCBI-ProteinID: XP_009857807
LinkDB
Position
2:complement(2911997..2921440)
AA seq 908 aa
MSLVWRLQPVFSLQKKFLTSLKLKNAPNRLSSHQSVKNDVPYESSIHRSKNKNSMKNKIP
TEADVVVIGAGSVGCSTAYHLSKLGAGKVVMLEKSQITSGTTWHTAGILWSFRHSESETI
MQLQTRDLISKILPEETGEDAGWLETGTLNTARTKDQFIDYLQHSAFAKAMGVEILQLQL
NEVNDIHPLLNTSDLYGVIYSPACGTMDPATYCMSYVKAAAKHGLEMIENCTVNGITMKE
DYLGLKRVQSVETNHGTIRTNNVVNCAGAWAPYIAQTINENVPQLVYKHAYVVTEAIEGI
LNTPMIKDHGSIYLKPQGNALQFGGYETNPILVKNLPKDFSFGLYDMDWDIFSVHTNAAI
NRIPSVETTGIRSTVCGPESFTPDGQPNMGESTQVRGYFHGSGFNSGGMMLGGGAGRQLA
HWVIHGKPEIDLVNCDIRRHPVNLSNPNKWLLEKSHEKFAKRFNIHYPHDQSLGGRNQRK
GRLYQEHADAGALFGDKFGFERPAYFVKDKDGRPQSDLHLLEYDFYGAYNNKLHDPHNYY
DEVLKDCTFDFPEKSHRLINDECMKCRNSVAVFDLSYMAKLYIGGKDADQTVAKLLTRDI
TKTNNRFVYSLMLNKDAGVECDVLATKMTTKSGETEYYITAPTSAAQHCLAHIQRLIQNE
KLHSTVEDRTEDTSIISVQGPMSGHVVYELTKDAALESLKYSEWKSTKVGDHAIMLGRLS
FVGEFGFEIHCSSDHVNQIFAQVMEEVHKHNGCMAGYRAMESLSTEAGFHHWPHSINANV
NPMEARLTQFCSPTTKYLGGKALESLKSSPRQKLLAYFTVDSNVPVLGHEIIWRNNEIVG
FLRAADYGYSLGTNIGYGYVKIPSVNDEIIKSGNYQIEIMGKMYPAQASINTPYLPYLSK
MFEMKKFT
NT seq 2727 nt   +upstreamnt  +downstreamnt
atgagcctggtatggagattgcagcctgttttttctttacaaaagaagtttctaacaagt
ttgaaattaaaaaatgccccaaaccgactctcatcacatcaaagtgttaaaaatgatgtt
ccctatgaaagctccatacaccggagcaaaaataaaaattcaatgaagaacaaaatacca
actgaagcagatgtggttgtcataggggctggcagtgttggatgcagcacagcttatcat
ctttctaaacttggtgcaggaaaagttgtcatgctggaaaaaagtcagatcacgtcagga
acaacttggcacacagcaggtatactgtggagcttcaggcacagtgagtctgaaacaata
atgcaacttcagacgagggatctgatcagtaagatattgccggaggaaacaggtgaagac
gcaggctggttagagacggggacattgaacacagcgagaacaaaagatcaattcatagac
tatttacaacactcagcgtttgctaaagcgatgggtgtggagatacttcagttgcagcta
aatgaagttaatgatatccatcctttgttaaacaccagtgatctgtatggtgttatatat
tcaccagcttgtggtactatggacccagctacatactgcatgtcttatgtaaaagctgct
gcaaaacatggtttagagatgattgaaaactgcacagtgaatggcataacaatgaaagag
gattaccttggtttaaaacgagttcaatctgttgaaaccaatcatggcacaattagaaca
aacaatgttgtaaactgtgcaggagcatgggcaccttatatagcacagacaattaatgaa
aatgtgccgcaattggtgtataaacatgcttatgttgttactgaagcaattgaaggcatt
cttaacactccaatgatcaaagaccatggttcaatctatttgaaaccacaaggaaatgca
ttgcaatttgggggatatgaaaccaacccaattttggtaaaaaatttgccaaaagatttt
tcattcggtctttatgacatggattgggacatatttagcgttcacacaaatgcagctatc
aacagaataccatctgtggaaacaactggaatcagatcaactgtttgtggaccagaatcc
ttcacacctgatgggcaaccaaacatgggagaatctacacaagtgagaggatatttccat
ggaagtggattcaacagcggaggaatgatgttgggaggaggagcaggaagacaactcgct
cactgggtcattcatggaaaaccagaaattgatctggtgaactgtgacatcagaaggcac
cctgtaaatctatccaacccaaacaaatggttgttggaaaaatcccatgagaaatttgcc
aagcgattcaacattcattatcctcatgaccaaagtcttggtggaagaaaccaacgtaaa
ggaagattgtatcaggagcatgcagatgctggtgctttatttggggataaatttggattt
gagcgcccggcatattttgtcaaggacaaagatggccgccctcaatctgatcttcatttg
cttgaatatgatttctatggtgcttataataataaacttcacgatcctcacaattattat
gatgaagttttaaaagattgtacatttgattttccagaaaaaagccatcgtttgattaat
gacgagtgcatgaagtgcagaaactcagtggctgtgtttgacttatcatatatggccaag
ttgtacattggtggaaaggatgccgatcaaacagtggccaagttgctcaccagagacatt
actaagaccaacaatcgctttgtatattctctcatgttgaataaagatgcaggagtggaa
tgtgatgtcttggctacaaagatgacaactaagtctggagaaacagagtactacataact
gccccaacttctgctgcacaacattgtcttgcccatattcaacgtttgatacaaaatgaa
aagttgcatagcactgtggaagaccgaacagaggacacatccattatcagtgtgcaagga
ccaatgagtggtcatgtggtgtatgaattgaccaaagatgctgcgctggaaagtttaaaa
tattcagagtggaagtcaactaaagttggtgatcatgcgattatgcttggcaggttgtca
tttgttggagagtttgggtttgaaattcattgctcaagtgatcatgttaaccagatattt
gcacaagttatggaagaggttcataaacataatggttgtatggcaggttacagagcaatg
gaatctctcagcactgaagcaggattccaccactggcctcactcaataaatgcaaatgta
aaccccatggaagcacgtctcacccaattttgttcaccaactacaaaatatttgggtggg
aaagcactagagagtctaaaatcctcacctcgccagaaacttctggcttactttactgtg
gacagcaatgtcccagttctcggccatgaaattatttggagaaataatgaaattgttggt
ttcttgcgtgctgccgactatggttactctcttggaacaaacataggttacggatatgta
aagattccatcagtgaacgacgagattattaagagcggaaattatcaaattgagataatg
ggaaagatgtatccagcccaggcaagcatcaacactccatatttaccatacttgtccaag
atgtttgaaatgaaaaaatttacttaa

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