Ciona intestinalis (yellow sea squirt): 100180391
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Entry
100180391 CDS
T01056
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase-like 1
KO
K12733
peptidyl-prolyl cis-trans isomerase-like 1 [EC:
5.2.1.8
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100180391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100180391
03110 Chaperones and folding catalysts [BR:
cin03110
]
100180391
Enzymes [BR:
cin01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
100180391
Spliceosome [BR:
cin03041
]
Complex B
Other components
Prp19-related factors
100180391
Complex C
100180391
Chaperones and folding catalysts [BR:
cin03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
100180391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
100180391
NCBI-ProteinID:
XP_002127845
Ensembl:
ENSCING00000004845
LinkDB
All DBs
Position
8:complement(421039..422162)
Genome browser
AA seq
175 aa
AA seq
DB search
MSGIPPSTWRPSHVIFETSAGTIEIELYWNHAPKTCANFAELCRRGYYNKTIFHRIITNF
MIQGGDPTGTGRGGSSIYGGQFEDEFSRELKHTGAGVLSMANSGPNTNGSQFFITLAPTQ
WLDMKHTIFGRVSGGIKVVNLLGMVETSAQDRPVQDVVVRNAYAADEGGNRIDTY
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaatacctccctcaacatggcgaccttcacatgttatttttgaaacgtcagca
gggacgattgagatagaactgtactggaatcatgcacccaaaacatgtgcaaattttgct
gagctgtgtaggagaggctactacaataaaacaatttttcatcgtattattacaaacttt
atgatacaaggaggtgacccaactggaactggtcgtggaggctcctcaatttatggcgga
cagtttgaagatgaatttagtcgcgaactaaaacacacaggtgctggtgtgctttcaatg
gcaaattctggccctaacaccaatggcagccagttttttatcacccttgctcctacccag
tggttagatatgaagcatactatatttggaagggtgagcgggggtataaaggtggtaaat
cttttgggaatggtggaaacaagtgcccaagaccgtcctgtgcaagatgtggtggtgcgc
aatgcttatgcagcagatgagggtggtaacaggattgacacttactaa
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