Ciona intestinalis (yellow sea squirt): 100182270
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Entry
100182270 CDS
T01056
Name
(RefSeq) alpha-N-acetylgalactosaminidase-like
KO
K01204
alpha-N-acetylgalactosaminidase [EC:
3.2.1.49
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00603
Glycosphingolipid biosynthesis - globo and isoglobo series
cin01100
Metabolic pathways
cin04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
100182270
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100182270
Enzymes [BR:
cin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.49 alpha-N-acetylgalactosaminidase
100182270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Melibiase_2
Melibiase_2_C
Melibiase_C
Melibiase
DNA_pol_B_3
Motif
Other DBs
NCBI-GeneID:
100182270
NCBI-ProteinID:
XP_002130547
Ensembl:
ENSCING00000019677
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MRVTIVVLLLVHYALSLNNGLVRTPPMGWLAWERYRCNTNCAQFPDDCIGEKLFMRMADR
LVSDGWRDVGYEYVNIDDCWPSRERDANGRLVGNSTRFPSGIKALADYVHSKGLKLGIYS
DCGKLTCGGYIASGGNEKIDAETFAAWGVDMLKYDGCYSNETSRKVNYPLMGAELNKTGR
PIVYSCSWPAYEGGLPPKVNYTELNAICNLWRNYGDIQDSWDDVVDIMNWWGDNQDVLIP
AAGPGGWNDPDMLIGGDYTLSLDQTKTQFGMWAMLAAPLFMSNDLSKLEPDIKTVLQNRD
VIAVNQDVLGVQGRRFIKQDSIQVFSKPLDKGEFAVAAFSTRTDGTPHAIKFSLNDLKIS
GAKFYSLFDLFESKHLGKYSTAEELDIYVDPNGISMFRASPISVENIFVEEVFEINENF
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcaccattgttgttctactgttagtccattacgccctttcattaaacaatggg
ctggtccgcaccccaccaatgggttggttggcttgggagaggtataggtgcaacaccaac
tgcgctcaatttcctgatgattgtatcggagagaagttgtttatgaggatggctgacaga
ttagtgtccgatggttggcgagacgtcgggtacgaatatgtcaacatagatgattgttgg
ccatcgagggaacgcgacgctaacggaagactggtcgggaattctacgagatttccgagc
gggatcaaagctttggcggattatgttcattcaaagggattgaaacttgggatttacagc
gattgtggcaaacttacatgcggtggttatattgcctccggtggtaacgagaagattgat
gcggaaacgttcgcagcatggggagttgatatgttaaagtatgacggttgttacagcaat
gaaacatcaaggaaggttaactaccctctgatgggggccgagttgaacaagacgggacgt
cccatcgtgtactcgtgtagttggccagcttacgagggggggcttcctccaaaggtcaac
tacactgagttgaatgcgatttgtaacttatggcgaaactatggtgacatccaagactca
tgggatgatgtggtcgatataatgaactggtggggtgacaatcaggacgtgttgatacca
gcagcaggtcctggggggtggaatgatccagatatgttgattgggggagattatacactg
agtctcgatcaaactaagacacagtttggaatgtgggcaatgttggctgctccacttttc
atgtcgaatgatttaagtaaattggaacccgatataaagacggtgttgcaaaaccgtgat
gtcatagctgtcaatcaagatgtgcttggtgtccaaggaaggcggtttattaagcaagat
tcaatacaggtattttcgaagccattagacaaaggtgaatttgcggttgctgcgtttagc
acaagaaccgatggaacgcctcatgcgataaagtttagtctgaacgatttaaaaatatcg
ggcgccaagttttattcattatttgatttattcgagtcgaagcatcttggcaaatattcc
acagcagaagaattggatatctatgttgacccgaatggaatctctatgtttcgtgcttca
ccgatttcagttgaaaacatctttgttgaagaagtttttgaaataaatgaaaatttctag
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