Ciona intestinalis (yellow sea squirt): 100182893
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Entry
100182893 CDS
T01056
Name
(RefSeq) galactocerebrosidase
KO
K01202
galactosylceramidase [EC:
3.2.1.46
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00600
Sphingolipid metabolism
cin01100
Metabolic pathways
cin04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
100182893
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100182893
Enzymes [BR:
cin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.46 galactosylceramidase
100182893
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_59
Glyco_hydro_59_C
Glyco_hydro_59M
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
100182893
NCBI-ProteinID:
XP_002122521
Ensembl:
ENSCING00000009496
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Position
2:complement(3348698..3352536)
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AA seq
693 aa
AA seq
DB search
MQNTLGVVLLGIYCNVALSQKVRTFEKPSHWQSKISTRLSGSYKIGDVNGVGRQFDGIGG
LSGGGATSRLLMNYADPYRSHVLDFLFKPNFGASLHILKVEIGGDGQSTEGTEASHMRNA
NDENYTRGYEWWLMKEAKSRNPNIKLVGLPWAFPGWIGQGTVWPYKNREVTAQYITKWVL
GAKSEHNLTIDYVGIWNERPFDVEYIKTLRRTLNSAGLSHVQIIADDGSVLSAISNDIMH
DQELAEAVAVIGTHYPGTVSSKTTKSTGKPIWASEDYSTFNDVIGAGCWARILNQNLVNG
NMTATIAWNLITSYYNDLPYKRCSLMTANQPWSGNYVLDDPLWVTSHTTQFAQPGWKYLQ
TVGHLSGGGSYVALTDQKGNLTIIIETMSHDQSICIRPPLPAYTVEDQNATFVLEGSFKG
KVTKMQMWFTQLGQAGNRDVFLNKGSVAVDKTGQVSIHLPIDSVITLSTITTAMKGSYPT
PPAPAEFPLPYSDSFDKTLGFSEPFNFADQAGSYETFHNNTSDDGHEWTFRQVVEERPVT
WCSDPNQTITVIGNYKWSHITVEVSIKSESTYGAFVAMRVDKGGCDAREARGVYFWLMKN
GSIMLTSDLTAKTMLKQCYFYWECFVADYSELGWNKVKLTIDSSNKIHAYLNGKLALEHT
ITKDSNIPDNGFVALGTSDYGTAQFDDFSVTSA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatacattgggtgtcgttctattaggcatatattgcaatgtagcattatcccaa
aaagttcgaacatttgaaaagccgtcacattggcaaagtaaaatttcaacaaggttatct
ggttcatacaaaatcggtgacgtgaatggagtgggtcgacaattcgatggaatcggtggt
ctatcaggtggaggagcaaccagtcgtttattgatgaattatgccgatccttatagatcg
cacgtcttggattttttgttcaaaccaaactttggggcatcacttcacattttaaaagtg
gaaataggtggagatggccagagtactgaaggaactgaagcaagtcacatgagaaatgca
aatgatgaaaactatacccgtggctatgaatggtggttgatgaaagaggcaaaatcacga
aatccaaacataaaacttgtggggttaccttgggcattccctggttggattggccaggga
acagtgtggccatataaaaaccgtgaggtgacagctcagtacattacaaagtgggttctt
ggtgcaaaatctgagcacaacttgacaattgattatgttggcatatggaatgaaagacca
tttgatgtggagtatattaaaactctccgtcgtactttaaactctgcaggattaagtcat
gttcaaattatcgccgatgatgggtcagtactgtctgctatttctaatgacattatgcac
gaccaagagcttgcagaggctgtggcggttataggaactcactatccggggactgtctca
agcaaaaccactaaaagcacaggcaagccaatatgggcgagtgaagactacagcactttt
aatgatgtgattggtgctgggtgttgggcacgaatattgaatcagaatttggtgaatgga
aatatgactgctacaattgcttggaatttaataacaagctattataatgatctgccatat
aaaagatgtagtctgatgacagcaaaccaaccatggagtggtaactatgtgttagatgat
cctttatgggtaacttcgcacaccacacagtttgctcaaccagggtggaaatatctgcag
actgtgggccatttaagtggcggtgggagttatgtggcattgacggatcaaaaagggaat
cttacaattatcattgaaacaatgtcacatgaccagtctatttgcatcagaccacccctg
ccagcatacacagtagaagaccaaaacgctacttttgttttggaaggcagcttcaaagga
aaagtgactaaaatgcaaatgtggtttacgcagcttggacaagctggaaatcgtgatgta
tttttaaacaaaggatcagttgcagttgacaaaactgggcaagtatcaatccatttgcca
attgattccgtcatcactttatcaacaattacaacagcaatgaaaggaagttatccaaca
ccacctgcccctgcagaatttcccttgccttactcagattcttttgataaaacactcggg
tttagtgaaccctttaactttgctgaccaagctggttcatatgaaacatttcataataat
actagtgacgatggccacgaatggacatttagacaggtggtggaggaacgtccagtgact
tggtgcagtgacccaaatcaaacaataaccgttatagggaattataagtggagtcatatc
acggttgaagtgtcaataaaatctgagtcaacatatggtgctttcgttgcaatgagagtt
gacaaaggtggttgtgatgctagggaagcacgaggtgtttatttctggcttatgaaaaat
ggttctatcatgctaacgtcagatttaacggccaaaacaatgttgaaacaatgctatttc
tattgggaatgctttgtagctgactattctgagttgggttggaacaaagtaaaactcaca
attgattcaagcaacaaaatccatgcatacttaaatgggaagcttgcattagaacataca
ataacaaaagattcaaatattcctgataatggatttgtggcattgggaacctccgactat
ggaactgcccaatttgatgactttagtgtaacatctgcataa
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