Ciona intestinalis (yellow sea squirt): 100182902
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Entry
100182902 CDS
T01056
Name
(RefSeq) tropomyosin alpha-1 chain-like
KO
K10373
tropomyosin 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04814
Motor proteins
cin04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100182902
04820 Cytoskeleton in muscle cells
100182902
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100182902
04147 Exosome [BR:
cin04147
]
100182902
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
100182902
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of microglial cells
100182902
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Crescentin
Sec20
DUF4201
CbiG_C
Motif
Other DBs
NCBI-GeneID:
100182902
NCBI-ProteinID:
XP_002125569
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Position
2:complement(1793562..1798274)
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AA seq
225 aa
AA seq
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MDKIKGKISCMISELDNKEEAIEKLTEDLRLADIKRRCVEEENINLEHQLNAKENFIGKL
EPLLDETVKKLASFEERESANERIIQKLESDYETSVIKCEKLEDQLKEIRFISEETGRKY
EEATRRLTFMDTELEKSEQRIEKAEKKYKEVSSNLHLSLQCIKKYESMNEKLKEKEIQTE
DELCTLQKRLYESENLRAIAENSLNNLAQQVGVLEDELYEVKMKV
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggataaaattaagggtaaaataagttgcatgatatcagaactagataataaagaggaa
gctattgaaaaattgacagaagatttaagactggcagatataaaacgaagatgtgtggaa
gaagaaaacatcaatttagaacatcaattgaatgcgaaagagaattttattgggaaattg
gagcctttgttggacgaaactgtgaaaaaactggcttcattcgaagaaagagaatctgcc
aatgaaagaattattcaaaaactggaatcagattatgaaacttctgttatcaagtgtgaa
aagttggaagatcaactcaaagaaattagatttatttcagaagaaactgggagaaaatat
gaagaggcaactcggagattaactttcatggacacagagttggagaaatctgaacaacga
attgaaaaagctgaaaaaaaatacaaagaagtatcttctaacttacatctttctttgcaa
tgtatcaaaaaatacgagagtatgaatgaaaagctgaaagaaaaagaaattcagactgag
gatgaactgtgtactcttcagaaaaggttgtatgagagtgaaaacctgagggcaattgca
gaaaattcgttgaacaatcttgctcaacaggttggagttttggaagatgaactgtatgaa
gtaaaaatgaaagtttga
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