Ciona intestinalis (yellow sea squirt): 100183172
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Entry
100183172 CDS
T01056
Name
(RefSeq) alpha-L-iduronidase-like
KO
K01217
L-iduronidase [EC:
3.2.1.76
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00531
Glycosaminoglycan degradation
cin01100
Metabolic pathways
cin04142
Lysosome
Module
cin_M00076
Dermatan sulfate degradation
cin_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
100183172
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100183172
Enzymes [BR:
cin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.76 L-iduronidase
100183172
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Gene cluster
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Motif
Pfam:
Glyco_hydro_39
Glyco_hydro_39_C
SusE
Motif
Other DBs
NCBI-GeneID:
100183172
NCBI-ProteinID:
XP_002120937
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Position
3:complement(4795173..4797983)
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AA seq
646 aa
AA seq
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MKSKNFKITVIFWICNFVTIVSISATVEQKNVKQTEYKILVNEISADLHHFWESTGLCPP
RPHQNASDFLLSEDMKQNLLLISSVPHHGIKRVRVHWLLDLIKFQKQNYCFDRLDNFVKL
MRYNELYFGFELMGNPGNKFTDFDNMTQVLEWQDLVTMLAKRYISMFGVNFVKPWLFETW
NEPDHKDFDVVKMSVTGFLKYYDACSEGIKKASQLLSFGGPGASCRGEKFSKRCWALFEH
CTNGTNYITGKKGSRLDFISFHKKGHNDSTSILSAELETINRIYSEYKTLTKTPIINDEA
DPLVGWNKPLHWRADVTYAALVTKVISEHQHQIIANKSRSDINYHLLSNDNAFLSYAPHF
FTQRTLNARFQVNNTDPKYVFLVKKPVLIVMGLLSKLGNVQLKQVIKYNQQQSRIGGISS
VCMDCRTTEISTVIYNSENVEVTEKITKVNIEYSTAENTPLKPFKTYGNDTIRHMFCKID
NVLTNPYKVWQAVGSPSFPTPALFTKLQIASESHCTEPEPFTTTRFNLDLRLPSVVLHQI
CWKPTQQLHNPSELHLHKVSNNIVLLKWSDSKITTKCIMTYNVEFARDGRNFQTVNTFKV
LFNSFAHIACSDGCVSNTVYGSYRVQALDFWGRPGQYSKVMKHSSK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtaagaattttaaaatcaccgtcattttttggatttgcaatttcgtcacaatt
gtgtcaatttccgccaccgtagaacaaaaaaatgtaaaacaaacagaatataaaattctc
gttaatgagataagtgcggatttgcatcacttttgggagagcacaggactgtgcccacca
cgtccacaccaaaacgcatctgattttcttctctcggaagacatgaagcaaaatctcttg
ctaataagttctgtacctcatcacggcataaaacgtgtaagagtgcactggttgctagat
ttaatcaaatttcagaagcagaattattgctttgatcgcctagataattttgtaaaactt
atgcgttataatgagctttactttggttttgaactaatgggaaatccaggaaataagttt
acggattttgataacatgacacaagttctggaatggcaggaccttgttactatgcttgca
aagagatatatttctatgtttggagttaattttgtcaagccgtggttgtttgaaacctgg
aatgaaccagaccataaagattttgatgttgtcaaaatgtcagtcacgggatttcttaaa
tattatgatgcttgttcggagggaattaaaaaagcttcacagttgctttcatttggtgga
ccaggggcttcttgtcgtggtgagaagttttctaaaagatgctgggccctatttgaacac
tgtacaaatggaaccaattatatcactggtaaaaagggaagccgattagatttcatatca
tttcacaaaaaaggccacaatgattctacatccatactatctgctgagttggaaactatc
aacagaatttactctgaatataaaacgctaacaaagacaccaataataaatgatgaggct
gatcctttggttggttggaataaaccattgcattggagagcagatgtaacttatgcagca
ttggtaaccaaagtaatatcggaacatcagcatcaaataatagcaaacaaaagcaggagt
gatataaactaccacctgttaagcaatgacaatgcatttttaagttacgcaccacacttc
tttacccagcgaacattgaatgcaagatttcaagtgaataatacagacccgaagtatgtg
ttcttggttaaaaaacctgtgctgattgtaatggggctgttatcgaaactgggtaatgtt
caactaaaacaagtgataaaatataatcagcaacagtctaggattggtgggatttcttct
gtgtgtatggattgtagaaccactgaaatatcaactgttatttacaacagtgaaaatgtc
gaagtgacagaaaaaataacaaaggtaaatattgagtatagtactgctgaaaatacccct
ttaaagccgtttaaaacgtatggaaatgacaccataagacatatgttttgcaagattgat
aatgtgctgactaatccatacaaagtttggcaggcagtaggaagcccaagttttccaaca
ccagccttatttactaaactacaaattgccagtgagtctcactgtactgaaccagaacct
tttactactacaagatttaatctcgatttgcgtttgccaagtgttgtgctgcaccagata
tgctggaaacctacacaacaactgcacaacccaagtgaactgcatcttcacaaagtatcc
aataatattgtgcttttaaaatggtcagattctaaaattaccaccaaatgcatcatgacg
tataatgttgaattcgcaagagatggtcgtaactttcagactgtgaacactttcaaagtt
ctgttcaattcatttgctcacatagcatgttcagatggatgcgtatctaacacagtttat
ggttcatacagggttcaagctttagacttttggggcagacctggacagtattctaaagtt
atgaaacatagtagcaaatga
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