Ciona intestinalis (yellow sea squirt): 100184313
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Entry
100184313 CDS
T01056
Name
(RefSeq) troponin C, body wall muscle
KO
K05865
troponin C, slow skeletal and cardiac muscles
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04814
Motor proteins
cin04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100184313
04820 Cytoskeleton in muscle cells
100184313
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100184313
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
100184313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_9
EF-hand_8
EF-hand_5
MTIP_N
AIF-1
SPARC_Ca_bdg
MCM_C
Snf7
DUF3037
Motif
Other DBs
NCBI-GeneID:
100184313
NCBI-ProteinID:
XP_002124306
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All DBs
Position
6:356559..359148
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AA seq
162 aa
AA seq
DB search
MSLPEELKNECTAAFEIFTKDSTDGKLGADELGKVMRMLGQSPSDDEVQEIIRDFAEGDT
LALDEFLDFMAKQLNGGQDKREEDLSKEFKLLLKETFRWYDTDADGIISWSELKTALKNT
GEKIEDWEIDELMKDGDENMDKHIDFDEWINMMKELEGQIQC
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttccagaagaacttaagaacgagtgcaccgctgcgttcgaaatattcaccaaa
gattctaccgatggtaaactgggtgctgatgaacttggaaaagtcatgagaatgttagga
caatcaccaagcgacgatgaggtccaggaaatcatccgtgactttgctgaaggtgataca
ctggcgttggatgaatttcttgattttatggcaaagcagttgaatggtgggcaagacaaa
cgcgaagaagatttgagcaaagaatttaaattacttctgaaagaaaccttccgttggtat
gacactgacgccgatggtattatcagctggagtgaacttaagacggcgctaaagaacact
ggagagaaaatcgaagattgggaaatcgatgaactcatgaaggacggagatgaaaacatg
gataaacatattgattttgatgaatggatcaacatgatgaaggaattggaaggccaaata
caatgctaa
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