Ciona intestinalis (yellow sea squirt): 100185142
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Entry
100185142 CDS
T01056
Name
(RefSeq) amino acid transporter AVT1H-like isoform X3
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100185142
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
100185142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Phage_r1t_holin
Motif
Other DBs
NCBI-GeneID:
100185142
NCBI-ProteinID:
XP_002123170
Ensembl:
ENSCING00000015233
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MNQQTEMSGPVANNNDDEALIDIPTPQRKGLGVFVASVFIVGTMCGSGILALPKAMVDAG
WAGIGLLIICGLISAFTGSILGKCWTILRMRYPEYEDQYIPDPYPTIGFRAAGRVGRFAT
RFCIIATLYGGATVYLLLIAGNISNLIESLGHVEIHACYWILIITAVLIPFTWLGTPKDF
WQAAIMAAVTTGIGGLLATIALIVMIPTTPPATHSNPTFNSFFNAFGTILFAFGGASVFP
TIQVDMKQPDMFPKSVVIGIISVLATYLPICVAGLVVLGDNMTHDNILDELAKTWLLYSV
IILITSHLLMAFLIVVNPINQDLEGFFNIADKFSIKRCIVRTSVMLSMLFVALSVPHFGV
ILSLVGGTTVTATNFIFPPLFYLMLSRQLTASDAPGELPNFPGKTFYTAVTSQTMSPPDP
VTPEVSENEETPKFTTPPHQDTPIPQIPWVNINVPTYMKLLLIEIILIGLVGGVASTYSV
ITSLVSGTSGFTVPCYVNWATADA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaacaaacagaaatgtcgggaccagtagctaacaacaacgacgatgaagctttg
attgatataccaacgccacaaaggaaaggcttgggagtattcgtagcatccgtgttcata
gtagggaccatgtgtggaagtggaatacttgcgttgcctaaagctatggtggacgctggg
tgggcaggtattggcctacttataatatgtgggttgatatctgccttcactggcagcata
cttggtaagtgttggacgatcctacgtatgagatatcctgaatatgaggatcaatatata
ccagacccataccctaccattggtttccgtgcagctggtagggtgggcaggttcgcaaca
aggttttgcatcatcgcaactttgtatggaggagccactgtttaccttctattgatcgcc
ggcaacatctccaacttgatcgaaagtctcggtcatgtagaaatacatgcttgttattgg
attctcataatcaccgctgtccttattccttttacttggctgggaactcccaaggacttc
tggcaagctgcgataatggctgctgttacaacggggattggcggattgcttgctactata
gcacttattgtgatgataccaaccaccccaccagccacacactccaacccaacattcaac
agtttctttaacgcttttggaacgattctctttgcttttggtggagccagtgtatttccc
accatacaagttgatatgaaacaaccggacatgtttcctaagtctgttgttataggaatt
atatctgtactggccacctaccttccaatatgtgttgctgggttggttgtccttggtgac
aacatgacacacgataatatactcgatgaacttgcaaagacttggcttctatactccgtt
attatactaatcacgtcccatcttctcatggctttcctcatagttgtgaacccaatcaac
caggacttagaaggtttcttcaatatagcagacaaattctcaatcaagcgttgtattgtc
cgaacgagcgtgatgctatccatgctctttgtcgccctcagtgtcccgcattttggggtg
atcctatctctagttgggggaaccaccgttactgctaccaactttattttccccccactt
ttctaccttatgttgtcacgacaactaacagcgagcgacgcacccggggaactccctaat
ttccccggaaaaactttctacaccgctgtgacatcgcaaacgatgtccccacctgaccct
gtgacccctgaggtgtcggaaaatgaagaaaccccaaagttcacgaccccccctcaccaa
gacaccccaataccccaaataccatgggttaatattaacgtacccacgtacatgaagctg
ctgctcatagaaatcatactaatagggttggttgggggcgtggcgtcaacatattccgtt
attacgtcacttgtttccggaacatcagggttcacagttccttgttatgtgaattgggca
actgctgatgcgtga
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