Ciona intestinalis (yellow sea squirt): 751572
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Entry
751572 CDS
T01056
Symbol
zf(ubp)-3
Name
(RefSeq) zinc finger protein 3
KO
K11834
ubiquitin carboxyl-terminal hydrolase 44/49 [EC:
3.4.19.12
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cin01002
]
751572 (zf(ubp)-3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
751572 (zf(ubp)-3)
Enzymes [BR:
cin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
751572 (zf(ubp)-3)
Peptidases and inhibitors [BR:
cin01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
751572 (zf(ubp)-3)
Ubiquitin system [BR:
cin04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
751572 (zf(ubp)-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
751572
NCBI-ProteinID:
NP_001041464
Ensembl:
ENSCING00000006716
UniProt:
Q1RL25
LinkDB
All DBs
Position
8:complement(1302649..1312288)
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AA seq
993 aa
AA seq
DB search
MDKAKKSPDSKINCKTSEDTQILSKNDSSPSEVKNITKCTRFRLSREYELRICNCKHILR
MTVGERHSVVNPQRWLCNVCFTTESVWACLSCPNVACGRYIHEHALNHYLETQHPLAIDV
NELYVYCYACEEYVLNDNKSGDIKVLRETLQAIRYQNFTGTTRSGHTLRTATISSDEDIQ
MRRRLQQQQLDRDDRNFTAIWHSRFVRQRKAFKYWLHYVRHKSEYKDEEPVSPNISPDES
PVRMESIRLREFAVLDLKTENDETVSSSPGSKDLLPCFNTCEISSANKVNSKDLSLEMDK
VTAMQEELTMEDTCKSTQSIIEIEIDTSDTVPNDHEQLDLSHERSDNKFSADISVKGHKS
EIKSEKESNFPEGDKTESKKVSRKDSVVEATQNTDTTQTRPKRANAASRYHEIMHRLSSF
VHIEPVKKRLKLTIPTPSAGRKTSVDLEDRRRSARLIQRTCEKAKAAEKARKKKGSKKKG
KTKKSYGKSTQKAQKGQKATRVTGSSKTSHRRIRTQSGLRSLYDSIPNKAVTSLIPGVTG
LRNLGNTCYLNSIIQVLGHLQKFRLCLLALRDLDGMDEHHDSLTSPVATHSRMGRRSTME
MYENQTNVSRRMLRLQSGLNGGHDGSASSEKDSVLPSTQLPPSLSLCHELNDLYHIMWSG
KWKLVSPCHFLSSVWQLIPSFRGYSQQDAQEFLCELLDKIVSELEWKRRRPQMMVSNGLA
TRISKVVHAVFEGKLHSMVKCLECGNISSTIEPFWDLSLEFPQRYHVNAYNWKNSNQGCT
LSEMLEKFTEAEQLDGGCVYNCAKCNVTEQQVTDRCNRRRRLSSRKITQKLTEAEKQIKI
SKLPQILRFHLKRFRWSGRNHREKITVPVNFPSEFDIRQHCWSDHQSNVSAPSSSDGNFV
YDLSAVVIHHGRGFGSGHYTAYCWNDIGKFWVHCNDSNLELCSIDDVMAAQAYILFYSQR
GLDPHPHFSAPCTPDMSPPISPSDSEVFDNDIG
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggataaagccaagaaaagtccagattcgaaaataaactgtaaaacttcagaagatact
caaatactgtccaagaatgattcttccccttctgaagttaagaatattacaaaatgtaca
aggtttcgcctctccagggaatacgagcttcgcatatgcaactgtaagcatattcttcgt
atgacagttggagagcgccactcagtggtaaatccgcagcgttggttgtgtaatgtttgt
ttcactacagagtcagtgtgggcgtgtctaagttgtcccaatgttgcttgtggaagatac
atacatgagcatgcgttgaatcattacctcgaaacacaacatcccctggcgattgacgtt
aatgaactgtacgtttattgctatgcttgtgaggagtatgtgctgaatgataacaagtca
ggtgatattaaagtactgcgggaaaccttacaggcaattcgataccagaactttactggc
actacaagaagtgggcacacactacgaactgctaccattagttctgatgaagatatacag
atgagaagaagattgcaacaacaacaactagatagggatgatcgtaacttcacagccata
tggcattccaggtttgtacgtcaaagaaaagcgtttaaatactggctgcattacgtgaga
cacaaaagtgaatacaaagatgaggagcccgtgtctcccaacatctccccagatgaatct
ccagtgaggatggaatcaattcggctgagggagtttgcagtcctggaccttaaaactgaa
aatgatgagacggtatcctcttctcccggatcaaaagatctgcttccatgttttaataca
tgtgaaatatcatcagcaaacaaagtgaattctaaagatttgtctttggagatggacaaa
gtaactgccatgcaagaagaacttaccatggaagatacatgcaaatcaactcagtctatt
atagaaattgagattgatacttcagacactgttccaaacgaccatgaacagttggattta
agtcatgaaaggtctgacaataagttttctgcggatatatccgtcaaaggacacaaatcg
gaaataaaaagtgaaaaagaatctaatttcccagaaggggataagactgaatctaaaaaa
gttagcagaaaagatagcgtagtagaagctactcaaaatacagacaccacgcaaactcgt
cctaagcgcgcaaacgctgccagtcgttatcatgagataatgcacagactttcatccttc
gttcatattgaacctgtaaaaaaacgattgaaattgacaataccgactccaagcgctggt
cgcaaaacttctgtggatttagaggacagaagaagaagtgcaagacttattcagagaact
tgtgaaaaggcaaaagctgcggaaaaagcaagaaagaagaagggaagtaaaaagaagggc
aaaacgaaaaaatcctatggaaaatcaacccaaaaagcacaaaaaggtcaaaaagcaact
cgagtgacgggttcttctaaaacttcccacagaagaattcgaactcagagtggtctcaga
tcactatatgatagcatccctaacaaagcagtcacttctttaataccaggagtcactggg
ctgagaaacttaggcaacacatgctatctaaattcaattatacaggtcttgggacatctt
cagaaattccgtttatgcttgttggcattgcgggacttagacggaatggacgaacaccat
gatagtttaacttcacctgttgctacacattctcgtatgggcagacgatctacaatggaa
atgtatgaaaaccaaactaatgtgtcaaggagaatgctgcggcttcaatcaggtttaaat
ggtggtcatgatggcagtgcttccagtgaaaaagattcagtgttgccatcaacacaactt
cccccttccctttctctttgccatgagttaaatgacctttaccacataatgtggtcgggc
aagtggaagctggtgtctccatgtcacttcctaagttcagtgtggcaactcattccttcg
tttcggggttattctcagcaagatgctcaggaattcttgtgcgagttgctcgataaaatc
gtctccgaattggaatggaagcgcagacgacctcaaatgatggtttccaatggtttggca
accaggatatctaaggtggttcatgcagtgtttgaaggcaaacttcacagtatggtaaag
tgtttggagtgtggtaatatatcaagcactattgaacccttttgggatttgtcgctagaa
tttccccagcggtatcacgtcaatgcatacaactggaagaacagcaaccaaggatgtact
ttatcggagatgttggagaaattcactgaagcagaacagctcgacggtggatgtgtgtac
aactgcgctaaatgcaatgttacggaacaacaagttacagatcgttgcaaccgtcgtagg
cgactttccagtcgtaaaataacccagaaactcactgaagcggaaaaacaaatcaaaatc
tcgaaactgccacaaatacttcgttttcatttgaagcgttttcgatggagtggtcgcaac
caccgtgaaaaaataacggtgccagtcaattttccttcggaattcgatatcaggcaacac
tgctggtctgatcatcagtccaatgtttctgctccaagcagcagtgatgggaactttgta
tacgatcttagtgctgtagttatacaccatggaaggggctttggatcaggtcattataca
gcatactgttggaatgatattggaaagttctgggtccactgtaatgattctaacctagag
ttatgctcaattgatgatgtaatggcagcacaagcgtacatacttttctacagccaacga
gggttagacccccacccccactttagtgccccatgtacccctgatatgagtccccctatt
tcacccagtgactcagaagtgttcgataatgacattggttga
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integrated database retrieval system
