Citrobacter sp. CFNIH10: C2U53_14670
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Entry
C2U53_14670 CDS
T05324
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cir
Citrobacter sp. CFNIH10
Pathway
cir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C2U53_14670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cir03400
]
C2U53_14670
Enzymes [BR:
cir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C2U53_14670
DNA repair and recombination proteins [BR:
cir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2U53_14670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
Helicase_RecD
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
nSTAND3
AAA_28
MukB
FtsK_SpoIIIE
PhoH
DEAD
T2SSE
Acetyltransf_6
UvrD_C
CbiA
DO-GTPase1
Bcl-2
TrwB_AAD_bind
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AUZ64976
UniProt:
A0A3Q8DGW6
LinkDB
All DBs
Position
2320428..2322245
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AA seq
605 aa
AA seq
DB search
MTLQKRLLEAVGQKQLRPLDVQFALAVTGEHEPAVTLAAALLSRDAGEGHVCLPLSQLAL
NADNPPFYSSCLSDIGEPENWEECLLASDAVSHGERPSPMVLYGDRLYLNRMWCNERTVA
HFFSEVNRPIEVDETLLTQTLEALFPTTNEINWQKVAAAVALTRRISVISGGPGTGKTTT
VARLLAALIQMAEGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPDDASTL
HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPSHGRIIFLGDRDQ
LASVEAGAVLGDICAWVNAGYTPERAQQLARLTGMPVPAGAGEDAATLRDSLCLLQKSYR
FGSDSGIGQLAAAINRGDKAAINDIFLQGFSDIDKRTLESSEDYTAMLENALAGYGHYLQ
LLQARAEPALIIQAFNEFQLLCALREGPFGVSGLNERIELAMQQKRKIHRLPHSRWYEGR
PVMIARNDSALGLFNGDIGVALDRGQGLRVWFAMPDGSIKSVQPSRLPEHETTWAMTVHK
SQGSEFDHAALVLPTQRTPVVTRELVYTAVTRARRRLSLYADERILGSAIATRTERRSGL
STLFK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgacgctacagaagcgattacttgaggccgtcgggcagaagcaactgcgcccgctggat
gtgcaattcgcgctggcggtgaccggcgaacatgaacctgccgtgacgctggcagcggcg
ttactcagccgggatgccggagaagggcacgtctgtttaccgctttctcaactggcgctg
aatgcagataatccccctttctattcttcatgccttagcgacattggcgaacccgagaac
tgggaagaatgcctgctcgcttccgacgccgtcagtcatggagagcggccatcgccgatg
gtcctttatggcgaccgtttgtatctgaaccggatgtggtgcaacgaacgtacagttgct
catttctttagcgaggtgaatcgacccattgaggtggatgaaaccttgctgacgcaaacg
ctggaagcgctgttcccgacgacaaacgaaatcaactggcaaaaagtcgccgcggcggtc
gcgctgacccgccgtatttcggtgatttcaggcgggccgggaacggggaaaacaaccacc
gtggccaggctgttggcggcgctgatccagatggcggaaggcgagcgttgccgtattcgc
ctggcggcgccgacgggtaaagcagcggcgcgtttgacggagtccttaggcaaggcgctg
cgtcagttgccgctgacggatgaacaaaagaaacgcatcccggatgatgccagcactctg
caccggttgctgggcgcgcaacccggcagtcagcgtttacgccatcacgcgggcaacccg
ctacatctggatgtgctggtggtggatgaggcgtcaatgatcgacctgccgatgatgtcg
cgcttgatcgacgcattgccgtcgcacgggcgtatcattttccttggcgatcgcgatcag
cttgcttcggtcgaggcgggggcggtgctgggggatatctgtgcctgggtgaatgcgggc
tatacccctgaacgggcacagcaactggctcgcctgacggggatgcccgttccggcaggt
gctggagaagacgccgccacgctacgggacagcctctgtctgctgcaaaagagctaccgt
tttggcagcgattccggcatcgggcaactggcggcggcgattaaccgtggcgataaggcg
gcgataaacgacattttcctgcaaggcttcagcgatatcgataaacggacgctggagagc
agtgaagattacaccgccatgcttgaaaacgcactggcaggttatggacactatctgcaa
ctgcttcaggcgcgcgcggagcctgcattaatcattcaggcattcaatgagttccaactg
ctgtgcgcgctgcgcgaagggccgtttggcgtgagcggactgaatgaacgtatcgaactg
gctatgcagcaaaagcgcaaaattcatcgcctgccacattcccgctggtatgaaggacgg
ccagtgatgattgcccgtaacgacagcgcgctgggcttgtttaacggcgatatcggtgtg
gcgctcgatcgtgggcaaggattaagggtctggtttgcgatgccggatggcagtattaag
tctgtgcagcccagccgcctgccggagcatgaaacgacctgggcaatgacggtgcacaaa
tctcagggctcggagttcgatcatgccgcgctggtgttacccacgcagcgcacgccggtg
gtgacacgggaactggtgtataccgccgtgacccgcgcacgtcgccgcctgtcgttatat
gccgatgaacgcatacttggcagtgcgattgccacccgaaccgaacgacgcagtgggctg
tcgacgttgtttaaatga
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