KEGG   Citrobacter sp. CFNIH10: C2U53_21550
Entry
C2U53_21550       CDS       T05324                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cir  Citrobacter sp. CFNIH10
Brite
KEGG Orthology (KO) [BR:cir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cir03400]
    C2U53_21550
Enzymes [BR:cir01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C2U53_21550
    5.6.2.6  RNA 3'-5' helicase
     C2U53_21550
DNA repair and recombination proteins [BR:cir03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    C2U53_21550
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII AlkZ-like AbiEi_4 PhoH
Other DBs
NCBI-ProteinID: AUZ66200
UniProt: A0A3S7DB64
LinkDB
Position
complement(3669065..3673738)
AA seq 1557 aa
MSAKNAPPPLPDIFSPATRDWFTSAFQHPTPVQSQTWAVTAANQHALVIAPTGSGKTLAA
FLYALDSLFREGEAAHATSSSDKEKKVTRILYISPIKALGTDVQRNLQIPLLGISEERKK
SGAPEVAIRVGIRTGDTSPQERAKLSRHPPDILITTPESLYLMLTSRARETLRGVETVIV
DEVHAVAGTKRGAHLALSLERLDTLLATSAQRIGLSATVRSVTAVAAFLGGDRTVTVINP
PSTRHPDIHIVAPAANLDDVLADNSDSGEAIHKGREGSIWPRIEAGILDQILSHRSTIVF
TNSRGLAEKLTARLNELYLSRQQALPQPQAEPVHFDSLTGSTSNRAQDAAEYIARSHHGS
VSKEQRAVTEHALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRASH
QVGGVSKGLFYPRTRRDLIDSAVIVECMYAGQLETLTPPRNPLDILAQQTVAAVSMDPLN
VDDWYALVRRASPWQDLPRSAFDATLDMLAGRYPSGDFAVFRPRIIWNRETGLLTARPGA
QLLAVTSGGTIPDRGMFSVLLPEGDEQAGSRRVGELDEEMVYESRVNDIITLGATSWRIQ
QITRDQVIVVPAPGRSARLPFWRGEGVGRPAELGERIGDFIHTMSDDNAERRLSPRLRDD
NVLSNIKGLIDDQKNATGVLPWSRHLVLERCRDEMGDWRVILHSPYGRRVHAPWALAIAG
RLHAQWGADASIVASDDGIVARIPDSDGKLPDAAIFLFEPEKLLRIVREAVSSTALFAAR
FRECAARALLMPGRTPGRRSPLWQQRLRASQLLEIAAGYPDFPIILETARECLQDVYDLD
ALEQVIRRLNTGEIQMSEVTTPTPSPFATDLLFGYVAEFMYATDAPLAERRASVLALDSE
LLGNLLGQGDPLELLDPEIIRQVEDELQRRAAGRKAQGMEGVYDLLRELGPMSVDEIAAR
HEGTLADIRTWLDELSAEKRIFPVVIADTAQMACMDDAARLRDALGIRLPATISPAWLHP
VNAPLRDLFLRFSRTHTLFTRAQIAQTFGLGVAVAGDQLRQLRDEGVLIPLRAGTSSTPD
EASTWVNEDVFHRLRIRSLHAAREATRPVPATSYTRLLLERQGLISSADGSPARLPSSST
GTLEGSDGVTRVIEQLAGVGLPASLWESQIFPARVRDYSPDMLDELLATGEVIWSGQKKL
GDDDGRVVLHLRDYLAETLSPPSGDSEALSDLQRAILDVLSGGGAWFAQQLSALIQTRAA
DAGGDEWLTPATLHEALWGLVWQGYITTDIWAPLRGLTRTVAASRQPSRRSPRMRRGRPA
YAAPRLSSIAVPVSYTTPALAGRWSLLPRETLNDTERMLACAENMLDRYGVIGRQAVIAE
NVPGGFPAMQTLCRSMEDSGRILRGRFVEGMGGAQFAERDTVDRLRDLTPSTSEQQAFTA
VALSANDPANPWGTLLPWPTHPSSLVPGRRNGAFVVISAGQLRLYLAQGGKKMMIWTENE
EMPSPEIFRALTSALRREPRLRFTLSEVNDKPVRQTPLFTLLREVGFSSSPQGLDWG
NT seq 4674 nt   +upstreamnt  +downstreamnt
atgtcagcaaaaaatgcgccgcctccgctgccggatattttctcaccggcaacccgcgac
tggtttacctcggcatttcagcatcccacgccggtgcagtcgcaaacgtgggccgtgacc
gccgcgaatcagcacgcgctagtgatagccccgaccggttcggggaaaacccttgccgcg
tttctctatgccctggatagcctgtttcgtgaaggcgaggcagcgcacgccacctcctcc
tctgacaaagaaaagaaagtcacccgaatcctctatatttccccgataaaagccctgggt
acggatgtccagcgcaacctgcaaattcccctgctggggattagcgaagaacggaagaaa
tccggcgcgccagaggtggctattcgggttgggatccgcaccggcgatacgtcgcctcag
gagcgtgcgaagctgagtcgtcatccgcccgatattctgatcaccacgccggagtcgctt
tatctgatgctcacctcccgcgccagagagacgctgcgcggcgttgaaacggtgatcgtc
gatgaagtacatgcggtagctggcacaaaacgcggcgcgcatcttgcgctgagtctcgaa
cgtctggatacgcttctggcaacgtcggcgcagcgcattggtttgtcggcgaccgtacgt
tcggttacagccgttgccgcttttctgggcggcgatcgtacggttaccgttatcaatccg
ccttctacccgtcacccggatatccacatcgtcgctccagccgccaatcttgatgacgtc
ttagcggacaatagcgacagcggcgaggccattcacaaggggcgagaaggttccatctgg
ccgcgcattgaagccggtattctcgatcaaatccttagccatcgttccaccattgttttc
accaactcgcgtgggctggcggaaaagctgacggcccgcctgaatgaactgtatctttcg
cgacaacaagcgttgccccaaccgcaggcagagccggtgcactttgactcgctaaccggg
tccaccagtaaccgggcgcaggacgccgcagaatacattgcccgttcgcatcatggttcg
gtgtccaaagaacagcgtgccgtcaccgaacatgcgctgaaatccggcgaacttcgctgc
gtggtggcgacctccagtctggagctggggatcgacatgggggcggttgatctggtgatt
caggtggcgacgcccctttctgtcgccagcggcctgcagcgcatcgggcgcgccagtcac
caggtcggcggggtatcaaaggggctgttctaccccagaacccgtcgggatctgattgac
tctgccgtcatcgtcgagtgtatgtacgccggacaactggaaacgctgacgccgccacgc
aacccgctggatattctggcgcagcaaaccgttgctgccgtatcaatggatccactcaat
gttgatgactggtatgccctcgtccgccgggcttcaccgtggcaggatttgccgagaagc
gcatttgacgccacgctggatatgctggcagggcgctatccctccggcgattttgccgtc
ttccgaccacgcataatctggaaccgcgaaactgggttattaacggcccgtcctggcgcg
cagcttctggcggtaaccagcggtggtaccattccggaccgcggcatgttcagcgtgctg
cttcccgaaggggatgaacaagccggatcgcgtcgcgtaggcgaactggatgaagaaatg
gtgtacgagtcacgcgtcaacgacatcatcacgctgggtgctacctcgtggcgaattcaa
caaatcacccgcgatcaggttatcgttgtccccgcgcccggacgctcagccagactgccg
ttctggcgcggcgaaggcgtcggacgcccggcggaactgggagaacgcattggtgatttt
atccatacgatgtccgatgacaacgcagaacgccggctctcaccccgactgcgcgatgac
aatgttctgtcaaatatcaaagggttaattgacgatcaaaaaaatgccacgggcgtgctc
ccctggagtcgtcatctggtgcttgagcgctgtcgcgatgaaatgggtgactggcgggtt
attctgcattccccttatggtcgtcgggtacacgcgccctgggcgctggcgattgccgga
cgcctccatgcgcagtggggggctgacgcgtcgattgttgccagtgatgatgggattgtc
gcgcgcataccggacagcgacgggaaactgcccgatgccgctattttcctgtttgaaccg
gaaaaactgctgcgcattgtccgggaggccgtcagcagtacggcgctgtttgctgcccgc
ttcagagaatgcgccgcccgcgccctgctgatgccgggccgcacgccagggcgtcgttcg
ccgctctggcagcaacgcctgcgcgccagtcagcttctggaaattgcggcgggctatcct
gatttccccattattctggaaacggctcgtgagtgcctgcaggacgtttacgatctcgac
gcacttgagcaggtcatacgccggttgaacaccggcgagatccagatgtctgaagtgacc
acgccaaccccctcacccttcgccaccgatctactcttcggctacgtcgcggaatttatg
tacgccaccgacgcgccgttggcggaacgtcgggcttcggtactcgcgctggacagcgaa
ctgctgggcaacctgttaggccagggcgatccactggagttgcttgacccggaaattatc
cgccaggttgaagatgaacttcagcggcgggcggcgggcaggaaagcccaggggatggaa
ggcgtttacgatttactgcgcgaactgggaccaatgagcgtcgacgaaattgccgccaga
cacgaaggaacgctcgctgacatcaggacgtggcttgatgagctgtccgctgaaaaacgt
atcttcccggtcgttatcgcggacacggcgcagatggcctgcatggacgatgcagccaga
cttcgtgacgcgctgggaattcgcctgcctgcgacgatttcaccggcgtggctgcatccg
gtgaacgcgccgctgcgcgatcttttcctgcgcttcagccgtacccacacgttgtttact
cgcgcccagattgcgcaaacgttcgggttgggggtagccgtcgccggcgatcaactgcgt
caattgcgcgatgagggtgtcctcattccgttgcgtgccggtacttcttccacgcctgac
gaagcgtcaacgtgggtgaatgaggacgtatttcatcgtcttcgcatccgctcgctgcat
gcggcaagagaggcaacccgtccggttccggcaacgagctacacccgactgttgctggag
cgtcagggacttatttcatccgccgacggcagccctgcgcgcctaccgtcctcctccacg
ggtacgctggaaggaagtgacggcgtcacgcgtgttattgaacaactggccggagtcggc
ctgcctgcctcgttgtgggaaagccagattttccctgctcgtgtccgtgattattcaccg
gatatgctcgatgagttgctggcgacgggtgaagtcatctggtcaggacaaaagaaactg
ggcgacgatgatggacgggtggtactgcatttacgggattaccttgcagaaacgctttcc
ccgccatccggtgacagcgaggcgctttcagacttacagcgcgcaattttggacgttctt
tctggtggtggcgcatggtttgcgcagcaacttagcgcgttgattcagacgcgtgcggca
gacgctggcggtgacgaatggttaacgccagccacgctgcatgaggcactttggggtctg
gtctggcaagggtatatcacgaccgatatctgggctccgctgcgtggcctgacgcgtact
gtcgccgcatcgcgccagccgtcacgacgttcgccgcgtatgcgtcgtggacgcccggct
tatgccgcgccgcgcctctcgtccatcgctgtaccggtttcttacaccacgcctgcgctg
gccggtcgctggtcgctgctgccgcgagagacgttgaatgatactgaaaggatgctggcc
tgtgccgagaatatgctcgatcgctacggcgtaattggtcgccaggccgtgattgccgag
aatgtgcctggcggctttcccgccatgcagacgctgtgccgaagcatggaagattctggg
cgaattctgcgtgggcggttcgtggagggaatgggcggcgcgcagtttgccgagcgggac
actgtcgatcgtctgcgcgatctgacgccgtcgacgtctgaacaacaggcgtttacggcg
gtggcgctatctgcgaacgatcccgctaatccctggggaacgctactaccgtggccgacg
catccgtcatctctggtccccgggcggcgtaacggcgcgtttgtcgtgatttccgctgga
cagttgcggctgtaccttgctcagggaggaaaaaagatgatgatctggacagaaaatgag
gaaatgccttcgccggagattttcagggcgctgacgagcgccttacgccgtgaaccgcga
ctgcgtttcacactgtcggaagttaacgataaaccggtacggcaaacccctctctttacc
ctgctacgggaagtcgggttttccagttcgccgcaggggctggactggggatag

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