Entry |
|
Name |
(RefSeq) cell division cycle protein 48 homolog
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KO |
K13525 | transitional endoplasmic reticulum ATPase |
|
Organism |
cit Citrus sinensis (Valencia orange)
|
Pathway |
cit04141 | Protein processing in endoplasmic reticulum |
|
Brite |
KEGG Orthology (KO) [BR:cit00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102612408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cit03019]
102612408
03009 Ribosome biogenesis [BR:cit03009]
102612408
04131 Membrane trafficking [BR:cit04131]
102612408
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:cit04147]
102612408
Messenger RNA biogenesis [BR:cit03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
102612408
Ribosome biogenesis [BR:cit03009]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
102612408
Membrane trafficking [BR:cit04131]
SNARE
SNARE associated proteins
Others
102612408
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102612408
Exosome [BR:cit04147]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102612408
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
8:join(26972362..26972390,26972490..26972655,26973110..26973338,26973454..26974220,26974456..26974677,26974822..26974893,26975138..26975419,26975680..26976039,26976156..26976452)
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AA seq |
807 aa
MSHPAESSDANSGKKDYSTAILERKKSPNRLVVDEAINDDNSVVGLHPDTMDKLQIFRGD
TILIKGKKRKDTICIALADDTCEQPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGNLFDAFLRPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPIKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRRDN
PEAMDEDAAEDEVSEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGIGSEFRFA
EAGTGATTGADPFSTSAGGADDDDLYS |
NT seq |
2424 nt +upstreamnt +downstreamnt
atgtctcacccagctgaatcgtccgacgcgaattccgggaaaaaggactactccacggcg
attctggagaggaaaaaatcgccgaatcggctggtcgttgacgaggcgatcaacgatgac
aactctgtcgtcggcttgcaccctgacaccatggacaagctccagattttccgcggcgac
accattctcatcaaaggaaagaaaaggaaggacactatctgcattgctcttgctgatgac
acatgtgagcagcctaagataaggatgaacaaggttgttcggtcgaatcttagggttcga
cttggtgatgttgtatctgtgcaccagtgcccagatgtgaagtatggaaagcgtgttcac
attctgccaattgatgataccatcgaaggtgttaccggaaatctgtttgatgcattcttg
agaccttatttcacggaagcttatcgccctgtgaggaaaggagatttattccttgtcaga
ggaggaatgagaagcgtagagttcaaggttatcgagactgatccaggggagtattgtgta
gttgctccagacacagaaattttctgtgagggggaacctataaagagggaggatgaggat
aggttggatgaagttggttatgatgatgttggtggagtcaggaaacagatggctcagatt
cgtgagctagtggagctgcctctgaggcatcctcaactctttaaatcaattggtgttaaa
ccacccaaaggaatcttactttatggtcccccaggttcgggaaagacgttgatagccaga
gctgtggctaatgaaactggtgcattcttcttttgtatcaatgggccagagatcatgtcc
aaattggctggagagagtgaaagcaatctcaggaaagcctttgaagaagcagagaagaat
gctccatcaatcatctttattgatgaaattgattcaattgcccccaagcgtgagaagaca
catggtgaggttgaacgaagaattgtttcacagcttttaactcttatggatggtctgaaa
tcccgtgcccatgtcattgttattggagctactaacagaccaaatagtattgaccctgct
ttgagaaggtttggtagatttgatagggagatagatattggcgttccagatgaagttggg
cggcttgaagttctccgcatccataccaagaacatgaagctgtctgatgatgttgattta
gaaaggattgcaaaagatacacatggttatgttggtgctgaccttgctgctctttgtacc
gaagctgcactgcaatgcatcagggagaagatggatgtgattgacttggaagatgaaacc
atcgatgctgagattcttaattccatggctgtttcaaatgagcacttccaaactgcactt
gggacaagcaacccctctgctctgcgtgaaactgttgtggaagttcccaatgtcagctgg
gaggacattggaggccttgagaatgttaagcgggagcttcaagagactgttcaatatcca
gtggagcatccagagaagtttgagaaatttggcatgtcaccttcaaaaggtgtccttttc
tatggtccccctggatgtgggaaaactttactggccaaggcaattgcaaatgaatgccag
gcaaacttcatcagtgtcaaaggccctgagctgctcacaatgtggtttggtgagagtgaa
gccaatgttcgagaaatatttgacaaggcacgacaatctgccccatgtgttcttttcttt
gatgagctggactctattgcaactcagagaggaagcagtgtgggggatgcaggcggtgcc
gctgatcgggttttgaatcaacttctaactgaaatggatggcatgtcagctaaaaaaact
gttttcattataggggcgacaaacagacctgacattattgaccctgcccttttgcggcca
ggtcgacttgaccagttaatttatattcctctcccagatgaagattcacgccaccagatc
tttaaagcctgtttgagaaagtcaccagtctcaaaagatgttgatctgagagcgttggcc
aagtatactcaaggcttcagtggggctgacatcacagagatttgccaacgagcttgcaag
tatgccattagggaaaatatagaaaaggatatcgagagggagaggagaagaagggacaat
cctgaggcaatggatgaggatgctgccgaggatgaagtgtcagagattaaggctgctcat
ttcgaggagtccatgaagtttgctcgaaggagtgtcagtgatgctgatatccgcaaatat
caggcatttgctcagacgctgcagcagtcccgcggtattggatctgaatttaggtttgca
gaggcaggaactggggctacgactggtgctgatccgttttcaacctctgctggtggggct
gatgacgatgatctgtatagttag |