Citrus sinensis (Valencia orange): 102613029
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Entry
102613029 CDS
T02983
Name
(RefSeq) homeobox-leucine zipper protein HDG2 isoform X4
KO
K09338
homeobox-leucine zipper protein
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cit03000
]
102613029
Transcription factors [BR:
cit03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
102613029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
START
Homeodomain
Homeobox_KN
HTH_Tnp_1
MRP-L20
Motif
Other DBs
NCBI-GeneID:
102613029
NCBI-ProteinID:
XP_006469697
LinkDB
All DBs
Position
2:join(18689203..18689426,18689546..18689663,18689815..18690003,18690117..18690560,18690667..18690768,18691014..18691214,18691338..18691512,18691658..18691929,18692494..18692589,18692683..18693048)
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AA seq
728 aa
AA seq
DB search
MFQPTNMMEGQLHPLDMTQNTSESEMARLREEEFDSTKSGSENHEGASGDDQEQRPNKKK
RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERH
ENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDR
ISAIAAKYVGKPVVNYPLLSPPVPSRPLELAVGNFGAQPGIGGGEMYGAADLLRSISAPT
EADKPMIIELAVAAMEELIRMAQMGEPLWMTSLDGTAAVLNEDEYVRTFPRGIGPKPTGF
KCEASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVM
TAEFQVPSPLVPTRESYYVRYCKQHGEGTWAVVDVSLDNLRPSPAVRCRRRPSGCLIQEM
PNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGNAFGAKRWVATLDRQCERLASVMATNIPT
GEVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDP
GRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRSEWDILSNGGVVQEMAHIANGRDTGNC
VSLLRVNSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGF
AILPDGTSLHGANIGEAASGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIK
ASLSCESA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgttccagccaacaaacatgatggaagggcagcttcatcctctagacatgacccaaaac
acatctgaaagcgaaatggcacgtttaagagaagaagaattcgacagtactaaatctgga
agcgaaaatcatgaaggcgcttcaggtgatgaccaagaacagcgtcctaataagaagaag
cgatatcaccgccacactcagcaccagatccaagaaatggaagctttcttcaaagagtgt
ccacacccagatgacaagcaaaggaaagagttgagccgtgaattagggttagagcctttg
caagtcaaattctggttccaaaacaagcgcactcaaatgaagacccaacatgagcgccat
gagaacacacagcttcgaaccgagaatgaaaagcttagggctgacaatatgaggtacaga
gaagctcttagcaatgcctcatgtcccaattgtggaggccctactgctataggagagatg
tcttttgatgaacatcacttgagacttgaaaatgctcgattaagagaagagattgatcgc
atctcagcaattgcggcaaagtatgttggcaagcctgtggttaactacccgcttctctct
ccaccggtaccttctcgtccccttgaactagctgttggtaattttggtgctcagccaggc
attggaggcggtgagatgtatggagctgctgatcttcttaggtcaatcagtgccccgact
gaggctgataaacctatgataattgagctcgcagttgcagccatggaagaacttatcaga
atggctcagatgggtgaacctctatggatgactagccttgatggcacggcggctgtacta
aacgaagatgaatacgttaggacttttcctcggggaatcggacctaaaccaactggattc
aaatgcgaggcttctcgagaaactgccgttgttatcatgaaccacattagccttgttgaa
attctaatggatgtgaatcagtggtcaactgtgttttctggcattgtttctagagctatg
actctagaggtattatcaacaggcgttgcagggaattacaatggagccttacaagtgatg
actgcagaatttcaagtcccttcgccactagttccaactcgtgagagttactatgtgaga
tactgtaagcaacatggagaaggaacttgggctgtagttgatgtctccttggacaactta
cgccccagtcctgcagttagatgccggagaaggccatcaggatgtttaatccaagaaatg
cccaatggatactccaaggttacatgggttgagcatgttgaggttgatgataggggtgta
cataatctatacaagcagctagttagcactggcaatgcatttggggcaaaacgctgggtt
gctaccctagatcgacaatgtgaaagacttgcaagtgtcatggcaaccaatattccaact
ggagaagttggtgtgataacaaatcaagatgggaggaagagtatgctgaagctcgctgaa
agaatggtaataagcttttgcgctggagtgagtgcttcaactgctcatacgtggacgaca
ttatctggaactggagctgatgatgtaagagtcatgactagaaagagcgtagatgaccca
ggcagacctcctggcattgtactaagtgctgcaacctccttctggcttcctgttccacca
aaacgagtttttgattttcttcgtgatgagaacaccagaagtgagtgggatattctgtca
aatggcggagttgtccaagaaatggcacacattgcaaacggccgggatacaggaaattgt
gtgtctttactaagagtgaacagtgccaattcaagccagagcaacatgctgattttacaa
gagagctgcactgatccaacggcctcttttgttatctatgctcctgttgatattgttgcc
atgaatgtcgttcttaacgggggagaccccgattatgttgcccttctaccctctggattt
gccatacttcctgatggaacttcattgcacggggccaacattggtgaggctgcttccggt
ggatctctactaactgttgcatttcagattttggtagattcagttcctacagcaaagctg
tcgcttggttctgttgctactgttaacaacttgattgcttgcactgttgagaggataaag
gcttctctgtcatgcgagtctgcatga
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