Citrus sinensis (Valencia orange): 102625507
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Entry
102625507 CDS
T02983
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 21 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cit01002
]
102625507
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cit04121
]
102625507
Enzymes [BR:
cit01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102625507
Peptidases and inhibitors [BR:
cit01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102625507
Ubiquitin system [BR:
cit04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102625507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DEPP
Motif
Other DBs
NCBI-GeneID:
102625507
NCBI-ProteinID:
XP_006491730
LinkDB
All DBs
Position
4:complement(join(13259976..13260256,13260347..13260932,13261623..13261745,13261921..13262259,13262350..13262522,13262635..13262745,13262841..13262961,13263063..13263380))
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AA seq
683 aa
AA seq
DB search
METNTSKTLDDETDLVFAREIVDEKTLDPSWSSPETLYDHLHPSNHPLTLTDLDKDQNND
DDDDYEEIYRDTRPISSSYGRYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFIN
AILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVD
NLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLIS
KLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVS
VEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYH
LYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE
WVSSLLEAESIGMNADISNSSPKSVLDNVENDYTSRSGVANAESCKANEPSASAGDSSTK
FSCQLRSIDLEVNETRDTVKGMSACFTLASYRNAAEHETRDNTPMIDDASRPLSASDFYG
VFCNEKVNKLTSLEEDNCNPGVEKVKIVDGFHPLTPPRSPSPDIHSGKPRETYQVPREHL
KLESKGACKTQLERNGKDLERQEAVRCIKKTMTGERYMKLMAAVNDVSLNRKRRLKSSPC
KRFSPTRARCKHNHGSVMRRVAI
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaacacctccaaaaccctagatgacgaaactgaccttgtttttgctcgcgaa
attgttgatgaaaaaaccctagatccatcttggtcttcacccgaaaccctatatgaccat
ctccatccttcaaatcacccactgacattgactgatctcgataaagatcaaaacaatgac
gacgatgatgactacgaagaaatttatagggatacgaggcctatcagcagttcgtacgga
cgatataattggggatcatccttgctctcccgccccgtggagaagcactggcctattcaa
attaaacctactggagtgggtgcggggctggagaatttaggaaacacatgctttataaat
gctattttgcaatgctttactcatactctgccccttgttcaagctcttcgttcttttgat
catcccaggccctgcgatggtgctactgaagggttctgtgttatctgtgctcttagagat
cacattgaactatcattagcttcttcaggaaaagttctctctccacggaaacttgttgac
aatttgaactatatttcatcattttttcaaaggtatcagcaagaagatgctcatgaattc
ctgcaatgcttgttagatagacttgaaagttgttgcttggattctaagacaaaggatgag
agtttgtcttctcaaggagataacatagtacagcgggtttttggtggttgtctcattagc
aaattgcaatgctgcaattgtggcagttgttctgatacttatgagccactgattgatctg
agtttggagattgaagatgtgggatcccttggaagtgcactggagtctttcactaagctg
gaaaagattgaagacccagagacaaaatttacctgtgagaaatgtaaggaacaagtgtcg
gtggagaagcaacttatgctggacaaggtcccttcagttgcggcattccatttgaagaga
ttcaaaactgatggatcctatgttgtgaagattgacaagcacgtggagttccctctagag
cttgacctaaaaccttacaccagtggtggtcaaaacagtgatgtggagttaaaatatcat
ttgtatgcaattgtggagcacatgggatcttcacctacttgtgggcattactttagttac
atacgctcctctccagacacatggcacaggctaaatgattcaagggtcactagggttgag
gaagaatttgtgctttcccaggatgcctacattctgttctatgcgaagcagggtactgaa
tgggtttcgagtttgttagaagctgaaagcataggcatgaatgctgacatttcaaattca
tcccccaagtcagtccttgataatgtggaaaatgattatacatcccgttctggtgtagca
aatgcagaaagttgcaaggctaatgaacccagtgcttctgctggggatagttcaaccaag
ttctcttgtcaattaagatccatagatcttgaggttaatgaaaccagggatactgtaaag
ggaatgtctgcatgttttaccttggcatcataccggaatgccgctgaacatgagactaga
gacaatactcctatgattgatgatgcttccaggccgctttcagccagtgatttttatgga
gttttttgtaatgagaaggtaaataagttaacctctcttgaggaagataactgcaatccg
ggtgttgaaaaagttaaaattgttgatggtttccatcctttgacaccacctagatctcct
agtcctgacattcattctggcaagcccagagaaacctatcaggttccgcgtgagcatctg
aaattggagagtaagggtgcttgtaaaacacaattggagaggaatggcaaggatttagag
agacaggaagctgttcgatgcattaagaagacaatgacaggtgaaaggtatatgaaactt
atggctgctgtaaatgatgtttccttgaacagaaagagaagactcaaatcatctccatgt
aaaaggttcagcccaactagggctcgctgtaaacacaaccatggatcagtcatgcgtcgt
gtggcaatatga
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