Citrus sinensis (Valencia orange): 102631123
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Entry
102631123 CDS
T02983
Name
(RefSeq) uncharacterized protein LOC102631123 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cit03016
]
102631123
Enzymes [BR:
cit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
102631123
Transfer RNA biogenesis [BR:
cit03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
102631123
Prokaryotic type
102631123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
102631123
NCBI-ProteinID:
XP_006471140
LinkDB
All DBs
Position
5:join(4990916..4991179,4991703..4991759,4992491..4992568,4992819..4992872,4993124..4993206,4993429..4993528,4993620..4993682,4994056..4994274,4994474..4994534,4994629..4994801)
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AA seq
383 aa
AA seq
DB search
MTEFAKRISECSEQASKIPEEKEEDHQNDSVEEEEEYPEEVPETRTVTEVMSTNKRIQRY
LIAVEYIGTRFSGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRTDAGVHAASNVCHV
DVERISKRKPGEVLPPHDSSVVRRAVNHFLQKSEGDIMVTDVRCVPSDFHARFRAQERTY
FYRILSGPEPLSVFEKDRAWHVTEELDLHAMQEACKVLVGCHDFSSFRASGCQANSPIRT
LDELHVSEVVSTALFSSINQDSPVLSSIDNSIKLGMPNGGSNVFGIRKKHRSYEVIARAR
SFLYHQVRLIVGVLKAVGTGELTVSDVERILKAKTVTAASPMAPACGLSLGFVKYDLPED
DQTDAAESLETCPDPVSRKRRLQ
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagtttgcaaagcgcatttctgaatgttctgaacaagcttcgaaaataccagaa
gaaaaagaagaagatcatcaaaacgacagcgttgaggaagaagaagagtacccagaagaa
gttccagaaacaagaacagttactgaagtcatgagcacgaataaacgaattcaacgttac
ttgatagccgttgagtatattgggactcgcttctcggggtcccagaagcagctcaattgc
cgcactgttgttggcgtgcttgaggaggcatttcataaatttattgggcagccagtttca
atctctctctccagtcgaacagatgctggagtacatgctgcatcaaatgtttgccatgta
gacgttgaacgcataagcaaaaggaagcctggggaagtgctaccacctcatgactcttct
gtggttaggagagcagtgaatcattttttacagaagtctgaaggagatatcatggttacc
gatgttcgatgtgttccatctgacttccatgcaagatttagagctcaagaacgaacgtac
ttttatcgcatactgtctgggccagagcctttgtctgtttttgagaaagatagggcttgg
catgtaactgaggagttagatcttcatgctatgcaggaagcatgcaaagttcttgttgga
tgtcatgattttagttccttcagggcatcaggttgccaggccaactccccaattagaact
ttagatgagctgcatgtttctgaggtggtatccactgcacttttctcatcgattaatcaa
gattcgcctgtgcttagttcaattgacaatagcattaaattagggatgcctaatggtgga
agtaatgtatttggcataaggaaaaaacatcgctcctacgaggttatagcccgtgcgcgt
tcttttctttaccaccaggtgagactaattgtcggggttctaaaagctgtgggcaccgga
gaattgaccgtttctgatgttgaaagaatcctaaaagcaaagacggtgactgctgcgagt
cctatggcccctgcatgcggcctatcccttggctttgtgaaatatgatctgccggaagat
gatcaaacagatgctgcggaatctttagaaacatgtccggatccagtgagcaggaagaga
cgtctgcagtaa
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