Clostridium innocuum: G4D55_00035
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Entry
G4D55_00035 CDS
T06525
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ciu
Clostridium innocuum
Pathway
ciu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
G4D55_00035 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ciu01007
]
G4D55_00035 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ciu03016
]
G4D55_00035 (serS)
Enzymes [BR:
ciu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
G4D55_00035 (serS)
Amino acid related enzymes [BR:
ciu01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
G4D55_00035 (serS)
Transfer RNA biogenesis [BR:
ciu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
G4D55_00035 (serS)
Prokaryotic type
G4D55_00035 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
tRNA-synt_2
ZapB
Laminin_I
DMPK_coil
DUF2884
Nmad5
Motif
Other DBs
NCBI-ProteinID:
QIX07563
LinkDB
All DBs
Position
8879..10165
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AA seq
428 aa
AA seq
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MLDMKFLRENPEIVKENIKKKFQDHKIELVDKVIAMDKENRSLKQRGDELRSKRNAMSKE
IGGLMAKGLKDEANAIKAKVQAMADEMKETEVKETELAEKIKEMMMQIPNIIHPTVPVGK
DDSENVELQKYGEPVIPDFEIPYHTDIMERFEGIDLDSARKVAGNGFYYLMGDIARLHSA
VISYARDFMIDRGFTYVVPPFMIRSNVVTGVMSFAEMEGMMYKIEGEDLYLIGTSEHSMI
GKFIDTILDEKKLPYTYTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESAD
WFVKLYTNTVDLFRSLDIPVRTLECCSGDLADLKNKSVDVEAWSPRQKKYFEVGSCSNLT
DAQARRLGIRVKGENGKYFAHTLNNTVVAPPRMLIAFLENNLNKDGSVNIPEKLQPYMGG
TKILMPKN
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatatgaaatttttacgcgaaaatcctgaaattgtaaaagaaaacataaaaaag
aagtttcaggatcacaagattgagcttgtagataaagtgattgctatggataaagagaat
cgctctcttaaacaacgaggggatgagctgcgaagcaagagaaatgctatgagcaaggaa
atcggcggtctgatggccaaaggtttaaaggatgaggcaaatgctattaaagccaaggtt
caggctatggcagatgaaatgaaggaaacagaggttaaggaaactgagcttgctgagaaa
atcaaggaaatgatgatgcagattccaaatatcattcatcctacggtcccggttggtaag
gatgattcagaaaatgttgaactgcagaagtacggcgagcctgtgattcctgattttgaa
attccatatcatacagatattatggaacggtttgaaggtattgatctggatagtgcaaga
aaagttgcagggaacgggttctattatctgatgggagatattgcacgacttcattctgct
gtcatttcatatgcacgtgattttatgattgatagaggatttacatatgttgtaccgcct
tttatgattcgtagtaatgttgtgaccggggttatgagctttgcggaaatggaaggcatg
atgtataagattgagggggaggatttgtatctgatcggtaccagtgagcattctatgatt
ggaaaattcattgatacaattcttgatgagaaaaaacttccttatacttatacaagctat
tctccttgcttccgtaaagaaaaaggtgcacacggtattgaagaaagaggagtttaccgt
attcaccagtttgagaaacaggaaatgattgttgtttgcaaaccggaagaaagtgcagac
tggtttgtaaagctgtatacgaatactgttgatttattcagaagtctggatataccagtg
agaaccttagagtgctgttccggtgatcttgctgatttgaagaataagtctgttgatgtc
gaagcatggagtccacgtcagaaaaaatattttgaagtgggaagctgttctaatttgaca
gatgcacaggcaagacgtctcggcattcgcgtaaagggtgagaatggaaaatattttgct
catactttgaataatacggtggtagctccacctcgaatgctgattgcttttttagagaat
aatctgaacaaggacggcagtgtgaatattccggaaaaattgcagccatatatgggaggc
acaaaaatattgatgccaaaaaattaa
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