KEGG   Cellvibrio japonicus: CJA_1447
Entry
CJA_1447          CDS       T00721                                 
Symbol
holC
Name
(GenBank) DNA polymerase III, chi subunit
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
cja  Cellvibrio japonicus
Pathway
cja03030  DNA replication
cja03430  Mismatch repair
cja03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CJA_1447 (holC)
   03430 Mismatch repair
    CJA_1447 (holC)
   03440 Homologous recombination
    CJA_1447 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cja03032]
    CJA_1447 (holC)
   03400 DNA repair and recombination proteins [BR:cja03400]
    CJA_1447 (holC)
Enzymes [BR:cja01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CJA_1447 (holC)
DNA replication proteins [BR:cja03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CJA_1447 (holC)
DNA repair and recombination proteins [BR:cja03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CJA_1447 (holC)
SSDB
Motif
Pfam: DNA_pol3_chi DUF460
Other DBs
NCBI-ProteinID: ACE85801
UniProt: B3PDI9
LinkDB
Position
complement(1679785..1680204)
AA seq 139 aa
MTQVDFYVLPETTSEARWLFACRLIEKVQRMGMDILVAVDNPEQAREFDELLWTFKPESF
IPHQLLDIQQPAPVQITYNQESGNHQGLLLNLSSGIPPYFDRFARLSEIVIQEEKALKTS
RERFSFYKGRGYPIETRKL
NT seq 420 nt   +upstreamnt  +downstreamnt
atgacccaagtcgatttttacgtgttacccgaaacaaccagcgaagcccgctggttgttt
gcctgtcgtttgattgaaaaagtccagcggatggggatggatatcctggtcgcggtggat
aatccggagcaagccagggaattcgatgaattgctctggacctttaaaccggagagtttt
atcccccatcagctattggatatccagcaaccagccccggtgcagattacttataaccag
gagtctggcaatcatcagggtttattgcttaacttgagcagtggcataccgccctacttc
gaccgttttgcccgcctgagtgaaatagtgatccaggaggagaaagcgctcaaaaccagc
cgtgagcgtttcagtttttacaaagggcgtggctaccccatagaaacccgcaaactctaa

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