Callithrix jacchus (white-tufted-ear marmoset): 100385491
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Entry
100385491 CDS
T03264
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04136
Autophagy - other
cjc04140
Autophagy - animal
cjc04211
Longevity regulating pathway
cjc05010
Alzheimer disease
cjc05014
Amyotrophic lateral sclerosis
cjc05016
Huntington disease
cjc05017
Spinocerebellar ataxia
cjc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100385491 (ATG13)
04136 Autophagy - other
100385491 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
100385491 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100385491 (ATG13)
05014 Amyotrophic lateral sclerosis
100385491 (ATG13)
05016 Huntington disease
100385491 (ATG13)
05017 Spinocerebellar ataxia
100385491 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
100385491 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100385491 (ATG13)
03029 Mitochondrial biogenesis [BR:
cjc03029
]
100385491 (ATG13)
Membrane trafficking [BR:
cjc04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100385491 (ATG13)
Atg1 complex
100385491 (ATG13)
Mitochondrial biogenesis [BR:
cjc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100385491 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
100385491
NCBI-ProteinID:
XP_002755265
Ensembl:
ENSCJAG00000019823
UniProt:
U3DRN4
LinkDB
All DBs
Position
11:108392492..108462408
Genome browser
AA seq
550 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLTGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
TYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVTDTLRVPMAGLAFSHQLSSS
RLSYQPTALGVGSADLAYPVVFAAGLNATHPHQLLVPGKEGGVPLAPNQPVHGAQADQER
LATCTPSDGTHCAATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEDTDPMVNPPDSPDTESPLQGSLHSDGSSGGSSGNTHDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVR
EFDAFVETLQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacagaaaggacctggacaagtttattaaatttttt
gccctcaagactgtccaagtgattgtccaggctcgactgggtgaaaagatttgcactcgt
tcttcttcttccccaacgggttcagactggttcaacttagcaattaaagacatcccagag
gttacacatgaagcaaagaaggcactggcagggcagctgcctgctgtcgggaggtctatg
tgtgtggagatttcacttaagacatctgagggagattccatggagctggaaatatggtgt
cttgaaatgaatgaaaagtgtgataaagaaatcaaagtttcctacacggtgtacaacaga
ctgtcattgctgctgaagtctctccttgctataactagggtgacaccagcctacaggctc
tccagaaaacaagggcatgaatatgttatattatacaggatatattttggggaagttcag
ctgactggcttaggagaaggcttccagacagttcgtgttgggacagtgggcactcctgtg
ggcaccatcactctttcttgtgcttacagaattaacttggccttcatgtctaccaggcaa
tttgagaggaccccacctatcatggggattattattgatcactttgtggaccgtccctat
cccagctcctctcccatgcacccctgcaattacagaactgctggtgaggacactggagta
acatatccatctgtagaagactcccaagaagtgtgtaccacctctttttccacctcccct
ccatcacagtgtgtgtttactgtcacaaaggcacattttcagacccctactcctgtggtg
acggataccctgagggtccccatggcaggactggccttttcccatcaactctcaagctct
cgcctttcctatcagcctactgccctgggcgttggatcagctgacctggcttatccagta
gtgtttgctgctggcttaaatgctacacaccctcaccagctgttggttcctgggaaggaa
ggtggggtaccccttgctcccaaccagcctgtccatggtgcccaggctgaccaggagaga
ctggcaacctgcaccccttctgatggaacccactgtgctgccacaccctccagtagtgag
gatactgaaaccgtatcaaacagcagcgagggacgggcctccccacacgatgtcttggag
acaatctttgtccgaaaagtgggggcttttgtcaacaaacccattaaccaggtgaccctg
acgagtttggatatacccttcgccatgtttgctcccaagaatttggagctggaggatact
gatccaatggtgaatcctccagattccccagacactgaatctcctctccagggcagcctg
cactcagatggctccagcgggggcagcagtggcaatacccatgatgacttcgttatgata
gattttaaaccagctttttctaaagatgacattcttccgatggacctggggaccttctat
cgtgagtttcagaatccccctcagctgagcagcctctccatagatattggagcgcagtcc
atggctgaagacttggactcattaccagagaagctggctgtgcatgagaagaatgtccgt
gagtttgatgcctttgtggaaaccctgcagtaa
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integrated database retrieval system
