Callithrix jacchus (white-tufted-ear marmoset): 100388154
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Entry
100388154 CDS
T03264
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain isoform X2
KO
K23455
collagen type VIII alpha
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100388154 (COL8A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
100388154
NCBI-ProteinID:
XP_008980822
Ensembl:
ENSCJAG00000000632
UniProt:
F6ZJ54
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Position
15:84750049..84903649
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AA seq
744 aa
AA seq
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MAVLPDPLQLLGMLLTIFLSSIRLIQAGAYYGIKPLPPQIPPQMPLQIPQYQPLGQQVPH
MPLAKDGLAMGKEMPQLQYGKEYPHLPQYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQ
GPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGE
IGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGLKGLPGPQGLRGPK
GDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGVPGEPGPQGP
IGVPGVQGPPGIPGVGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKG
DRGMGGVPGALGPRGEKGPVGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVG
PQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGHKGLPGLPGVPGLLG
PKGEPGIPGDQGLQGPPGIPGIAGPSGPIGPPGIPGPKGEPGLPGPPGFPGVGKPGVAGL
HGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHA
YGAKKSKNGGPAYEMPAFTAELTTPFPPVGAPVKFDKLLYNGRQNYNPQTGIFTCEVPGV
YYFAYHIHCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPS
EQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctgcccgaccctctgcagctgctgggaatgctgcttaccattttcctgagc
tccatcaggctcattcaggctggtgcctactatgggatcaagccgctgccacctcaaatt
cctcctcagatgccactgcaaattccacaataccagcccctgggtcagcaagtacctcat
atgcctttggccaaagatggccttgccatgggcaaggagatgccccagttgcagtatggc
aaagaatatccacacctaccccaatatatgaaggaaattcaaccggcgccaagaatgggc
aaggaagcagtacccaagaaaggcaaagaaataccattagccagtttacgaggggaacaa
ggtccccgtggagagcctggcccaagaggaccacctgggccccctggtttgccaggtcat
gggatacctggaattaaaggaaaaccagggccacagggatacccaggagttggaaagcca
ggtatgcctggaatgccagggaagccaggagccatgggcatgcctggggcaaaaggagaa
attggacagaaaggggaaattggacctatggggatcccaggaccacaaggacctccaggg
cctcatggacttcctggcattgggaagccaggtggtccagggttaccagggcaaccagga
ccaaagggtgatcgaggactcaaaggactaccaggacctcaaggccttcggggtcctaaa
ggagacaagggcttcgggatgccaggtgcaccaggcgtgaagggccctccaggaatgcat
ggccctcctggccccgttggactgccaggagtgggcaaaccaggagtcacaggcttccct
gggccccagggccccctgggaaagccaggggttccgggagaacctgggccacaaggccct
attggggtaccaggggttcaaggacctcctgggatacctggagttggaaagccaggccag
gatgggatcccaggccagccaggatttccaggtggcaaaggggaacaaggactgccaggg
cttccgggacccccaggccttccagggattgggaaaccaggcttcccaggacccaaaggt
gaccggggcatgggaggtgttccgggggctcttggaccaagaggggagaaaggaccagta
ggtgccccaggaatagggggtcctccaggagagccaggcctgcctggaatcccaggtcct
atgggtcctccaggtgctattggttttcctgggcccaaaggagaaggtgggattgtaggg
ccacaggggccaccaggtcccaagggtgagccaggccttcaaggcttcccaggaaagcct
ggtttcctcggtgaagtagggcctcctggcatgaggggtttgccaggtcccatagggcct
aagggggaagctgggcacaaaggtttgccaggactccctggtgttccagggcttctcgga
cctaagggagagccaggaatcccaggggatcagggtttacagggccccccaggtatccca
gggattgcaggccctagcggccccattggaccacctgggattccaggccccaagggggag
ccaggcctcccagggcctcccgggttccctggtgtaggaaaacctggagtggcaggactt
catggccccccagggaagcctggtgcccttggtcctcaaggccaacctggccttccagga
cccccaggccctccaggacccccaggacccccagctgtgatgccccctacaccaccaccc
cagggagagtatctgccagatatggggctgggaattgatggtgtgaaacccccccatgcc
tatggggctaagaaaagcaagaacggagggccagcgtatgagatgcctgcatttaccgcc
gagctaaccacacctttcccaccggtgggggccccagtgaagtttgacaaactgctctat
aacggcagacagaactacaacccgcagacgggtatcttcacctgtgaggtccctggtgtc
tactactttgcataccacattcactgcaaggggggcaacgtgtgggttgctctgttcaag
aacaacgagcccgtgatgtacacatatgatgagtacaaaaagggcttcctggaccaggcg
tctgggagcgcagtgctgctgctcaggcccggagaccgagtgttcctccagatgccctca
gaacaggctgcgggactgtacgccgggcagtatgtccactcctccttttcaggatattta
ttgtatcccatgtaa
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