Callithrix jacchus (white-tufted-ear marmoset): 100388186
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Entry
100388186 CDS
T03264
Gene name
BRCA1
Definition
(RefSeq) BRCA1, DNA repair associated
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc01524
Platinum drug resistance
cjc03440
Homologous recombination
cjc03460
Fanconi anemia pathway
cjc04120
Ubiquitin mediated proteolysis
cjc04151
PI3K-Akt signaling pathway
cjc05206
MicroRNAs in cancer
cjc05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100388186 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
100388186 (BRCA1)
03460 Fanconi anemia pathway
100388186 (BRCA1)
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100388186 (BRCA1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100388186 (BRCA1)
09162 Cancer: specific types
05224 Breast cancer
100388186 (BRCA1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
100388186 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cjc01009
]
100388186 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjc04121
]
100388186 (BRCA1)
03036 Chromosome and associated proteins [BR:
cjc03036
]
100388186 (BRCA1)
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100388186 (BRCA1)
Enzymes [BR:
cjc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100388186 (BRCA1)
Protein phosphatases and associated proteins [BR:
cjc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100388186 (BRCA1)
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100388186 (BRCA1)
Multi subunit Ring-finger type E3
BRCC complex
100388186 (BRCA1)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Centrosome formation and ciliogenesis proteins
Centrosome duplication proteins
Regulators of centriole replication
100388186 (BRCA1)
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100388186 (BRCA1)
BRCA1-A complex
100388186 (BRCA1)
BRCA1-B complex
100388186 (BRCA1)
BRCA1-C complex
100388186 (BRCA1)
BRCA complex
100388186 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
100388186 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_2
zf-Nse
zf-RING_5
zf-RING_6
BRCT_2
zf-ANAPC11
zf-RING_10
Prok-RING_4
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
100388186
NCBI-ProteinID:
XP_002748065
Ensembl:
ENSCJAG00000012938
LinkDB
All DBs
Position
5
AA seq
1857 aa
AA seq
DB search
MDLSAVHVEEVQNVLNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQ
CPLCKNDITKRSLQESTRFSQLVEELLKIIHAFELDTGLQFANSYNFAKKENNSPEHLKD
EFSIIQSMGYRNRAKRLRQSEPQNPTLQETNLSVQLSNPGIVRSLRTKQWIQPQNKSVYI
DLGSDSSEDTINKKTYCSVGDQELLQITPQGTRDETSLDSAKKAPCEFSEKDITNTEHHQ
SSSNNLNTTEKHATERHPEKYQSSSVSNLHVEPCGTNTHASSLWHENSSLLLTKDRLNVE
KAEFCNKSKQPGLARSQHNRWAESEETCNDRQTPSTEKKVDLDADPLHGRKEWNEQKPPC
SEKPRDDTEDVAWLTLNSSIQKVNEWFSRSDELLTSDDSHDEGSESNAKVAEALEVLNEV
DGYSSSSEKIDLLASDPHDALICKSERVHCKSVESSIEDKIFGKTYRRKASLPNLSHVTE
NLIIGAFVTEPQITQEHPLTNKLKRKRRVTSGLHPEDFIKKADLAVQKTPEKINQGTNQM
ERNDQVMNITNSGHENKTKGDSIQNENNPNPVESLEKESFRSKAEPISSSISNMELELNI
HNSKASKKNRLRRKSSTRHIHELELVVSRNLSPPNYTEVQIDSCSSSEELKKKNYNQMPV
RHSRKLQLMEDKERSTGAKKSSKSNEQSKRHASDTFPELRLTNIPDSFTNCSNTNELKEF
VNPSLPREEKEKLETVKLSNDAKDPNDLMLSGESVLQIERSVESSSISLVPGTDYGTQES
ISLLEVSTLGKAKTEPNKCVSQCAAFENPKELIHGGSKDTRNGTEGFKYPLGPEVNYSQE
TSIDMEESELDTQYLQNTFKVSKRQSFALFSNPGNPEKECATFSAHSGPLKKQSPKVTLE
CEQKEENQGEKESNSEPVETVNITAGFPMVCQKDKPVDYAKGIEGGSGLCLSSQFRGNET
GLIIPNKHGLLQNPYHIPPLIPTRSFVKTKYKKNLLEENSEEHSMSPERAMGNKNIIPST
VSTISHNNRENAFKETSSSSINEVGSSTNEVGSSINEVGSSDENIQAEIGRNRRPKLNAM
LRLELLQPEMYKQSLPISNCKHPDTKKQEHEVVQTVNTDLSPCLISDNVEQHMGSSHTCQ
VCSETPEDLLDDGEIKEDTSFAEYGIKETSAVFSKSVQRGELSRSPSPFTHTHLAQVYQR
GAKKLESSEENLSSEEEELPCFQHLLFGKVSNTPQSTRHNTVAIECLSKNTQENLLSLKS
SLNDCSNQVILAKASQEHHLSEETKCSGSLFSSQCSELEDLTTNTNTQDPFLIDSSKQKR
HQSESQGVGLSDKELDSDDEERGIDLEEDNQEEQSMDSNLGEAAFGYESETSITEDCSGL
SSQSDILTTQQRDTMQDNLIKLQQEMAELEAVLEQHGSQPSHSSPSVITVSSAPEDLQNP
EQSTSEKAVLTSQKSSEYPISQNPEGLSADKFEESSDSSTNKNKEPGVERSSPSKCQSLD
DRWCVHSCSGSLQNGNSPSQEELIKVDVEEQQLDKSGPHDLMEPSYLPRQDLEGTPYLES
GISLFSDDPESDPSEDRAPESSHAGSIPSSTSTLKVPQFQVAESAKSLAAAHTTNTAGCN
AMEENVSRQKPELAASTERVNKRKSMVVSGLTPEELVPMYKFARQHHITLTNQITEETTH
VVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNH
QGPRRARESQGRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFTLGTGIHA
VVVVQPDAWTEDNGLHAIGQMCEAPVVTREWVLDSVALYQCQELDTYLIPQIPHSHY
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atggatttatctgctgttcatgttgaagaagtacaaaatgtccttaatgctatgcagaaa
atcttagagtgtccaatctgtctggagttgatcaaggaacctgtctccacaaagtgtgac
cacatattttgcaaattttgcatgctgaaacttcttaaccagaagaaagggccttcacag
tgtcctttgtgtaagaatgatataaccaaaagaagcctacaggaaagtacaagatttagt
caacttgttgaagaactattgaaaatcattcacgcttttgagcttgacacgggtttgcag
tttgcaaacagttataattttgccaaaaaggaaaataactctcctgaacatctaaaagat
gaattttctatcatccaaagtatgggctacagaaatcgtgccaaaagacttcgacagagt
gaaccccaaaatcctaccttgcaggaaaccaatctcagtgtccagctctctaaccctgga
attgtgagatctctgaggacaaagcagtggatacaacctcaaaataagtctgtctacatt
gacttgggatctgattcttctgaagatacaattaataagaaaacttactgcagtgtggga
gatcaagaattgttacaaatcacccctcaaggaaccagggatgaaaccagtttggattct
gcaaaaaaggctccttgtgagttttctgagaaggatataacaaatactgaacatcatcaa
tccagtagtaacaatttgaacaccactgagaagcatgcaactgagaggcatccagaaaag
tatcagagtagttctgtttcaaacttgcatgtggagccatgtggcacaaatactcatgcc
agctcattatggcatgagaacagcagtttattactcactaaagacagactgaatgtagaa
aaggctgaattctgtaataaaagcaaacagcctggcttagcaaggagccaacataacaga
tgggctgaaagtgaggaaacgtgtaatgataggcagactcccagcacagagaaaaaggta
gatctggatgctgatcccctgcatgggagaaaagaatggaatgagcagaaacctccatgc
tctgagaagcctagagatgatactgaagatgttgcttggttaacactaaatagcagcatt
cagaaagttaatgagtggttttccagaagtgatgaactgttaacttctgatgactcacat
gacgaggggtctgaatcaaatgccaaagtagctgaagcattggaagttctaaatgaagta
gatggatattctagttcttcagaaaaaatagacttactggccagtgatcctcatgatgct
ttaatatgtaaaagtgaaagagttcattgcaaatcagtagagagtagtattgaagataaa
atatttgggaaaacctatcggaggaaggcaagcctcccgaatttgagccatgtaactgaa
aatctaattataggagcatttgttactgaaccacagataacacaagagcatcctctcaca
aataaattaaagcgtaaaaggagagttacatcaggacttcatcctgaggattttatcaag
aaagcagatttggcagttcaaaagactcctgaaaagataaatcagggaactaaccaaatg
gagcggaatgatcaagtgatgaatattactaacagtggccatgagaataaaacaaaaggt
gattctattcagaatgagaacaatcctaacccagtagaatcactggaaaaagaatctttc
agaagtaaagctgaacctataagcagtagtataagcaatatggaactagaattaaatatc
cacaattccaaagcatctaaaaagaataggctgaggaggaagtcttctaccaggcatatt
catgagcttgaattagtagtcagtagaaatctaagcccacctaattatactgaagtacaa
attgatagttgttctagcagtgaagagctaaagaaaaaaaattacaaccaaatgccagtc
aggcacagcagaaagctacaactcatggaagataaagaacgttcaactggagccaaaaag
agtagcaagtcaaatgaacaaagtaaaagacatgccagtgatactttcccagaactgagg
ttaacaaacatacctgattcttttactaactgttcaaatactaatgaacttaaagaattt
gtcaatcctagccttccaagagaagaaaaagagaaactagaaacagttaaactgtctaat
gatgccaaagaccccaatgatctcatgttaagtggagaaagtgttttgcaaattgaaaga
tctgtagagagtagcagtatttcattggtacctggtactgattatggcactcaggaaagt
atctcattactggaagttagcactctagggaaggcaaaaacagaaccaaataaatgtgtg
agtcagtgtgcagcatttgaaaaccccaaggaactaattcatggtggttctaaagatact
agaaatggcacagaaggctttaagtatccattgggacctgaagttaactacagtcaggaa
acaagcatagatatggaagaaagtgaacttgatactcaatatttgcagaatacattcaag
gtttcaaagcgccagtcatttgctctgttttcaaatccaggaaatccagaaaaggaatgt
gcaacattctctgcccactctggacccttaaagaaacaaagtccaaaggtcactcttgaa
tgtgaacaaaaggaagaaaatcaaggagagaaagagtctaatagcgagcctgtagagaca
gttaacatcactgcaggctttcctatggtttgtcagaaagataagccagttgattatgcc
aaaggtattgaaggaggctctgggctttgtctatcatctcagttcagaggcaatgaaact
ggactcattattccaaataaacatggacttttacaaaacccatatcatataccaccactt
attcccaccaggtcattcgttaaaactaaatataagaaaaacctgctagaggaaaactct
gaagaacattcaatgtcacctgaaagagcaatgggaaacaagaacatcattccaagtaca
gtgagcacaattagccacaataacagagaaaatgcttttaaagaaaccagctcaagcagt
attaatgaagtaggttccagtactaatgaagtaggctccagtattaatgaagtaggttcc
agtgatgaaaacattcaagcagagataggtagaaacagaaggccaaaattgaatgctatg
cttagattagagcttttgcaacctgagatgtataagcaaagtcttcctataagtaattgt
aaacatcctgacactaaaaagcaagaacatgaagtagttcagactgttaatacagacctc
tctccatgtctgatttcagataacgtagaacagcatatgggaagcagtcatacatgtcag
gtttgttctgagacacctgaggacctgttagatgatggtgaaataaaggaagatactagt
tttgctgaatatggcattaaggaaacttctgctgtttttagcaaaagtgtccagagagga
gagctcagcaggagccctagccctttcacccatacgcatttggctcaggtttaccaaaga
ggggccaagaaattagagtcctcggaagagaacttatctagtgaggaagaagagcttccc
tgcttccaacacttgttatttggtaaagtaagcaatacacctcagtctaccaggcataac
actgttgctattgagtgcctgtctaagaacacacaggagaatttattatcattgaagagt
agcttaaatgactgcagtaaccaggtaatattggcaaaggcatcccaggaacatcacctt
agtgaggaaacaaaatgttctggtagcttgttttcttcacagtgcagtgaactggaagac
ttgactacaaatacaaacacccaggatcctttcttgattgattcttccaaacaaaagagg
catcagtctgaaagccagggagttggtctgagtgacaaggaattggattcagatgatgaa
gaaaggggaatagacttggaagaagataatcaagaagagcaaagtatggattcgaactta
ggtgaagcagcatttgggtatgagagtgaaacaagcatcactgaagactgctcagggcta
tcctctcagagtgatattttaaccactcagcagagggataccatgcaagacaatctgata
aagctccagcaggaaatggctgaactagaagctgtgttagaacagcatgggagccagcct
tctcacagctccccttccgtcataactgtctcttctgcccctgaggaccttcaaaatcca
gaacaaagcacatcagaaaaagcagtattaacttcacagaaaagtagtgaatatcctata
agccagaatccagaaggcctttctgctgacaagtttgaggagtcttcagatagttctacc
aataaaaataaagaaccaggagtggaaaggtcatccccttctaaatgccagtcattagat
gataggtggtgcgtgcacagttgctctgggagtcttcagaatggaaactccccatctcaa
gaggagctcattaaggttgatgtggaggagcaacaactggataagtctgggccccatgat
ttgatggaaccatcttacttgccaaggcaagatctagagggaaccccttacctagaatct
ggaatcagcctcttctctgatgaccctgaatctgatccttctgaagacagagccccagaa
tcatcccatgctggcagcataccatcttcaacctctacattgaaagtaccccagtttcaa
gttgcagaatctgccaagagtctagctgctgctcatactactaatactgctgggtgtaat
gcaatggaagaaaatgtgagcaggcagaagccagaactggcagcttcaacagaaagggtc
aataaaagaaagtccatggtggtgtcaggcttgaccccagaagaattagtgcccatgtac
aagtttgccagacaacaccacatcactttgactaatcaaattactgaagagactactcat
gttgttatgaaaacagatgctgagtttgtgtgtgaacggacactgaaatactttctggga
attgcaggaggaaaatgggtagttagctatttctgggtgacccagtctattaaagaaaga
aaaatgctgaatgagcatgattttgaagtcagaggagatgtggtcaatggaagaaaccac
caaggtccaagacgagcaagagaatcccagggcagaaagatcttcaggggcctggaaata
tgttgctatgggccgtttaccaatatgcccacagatcaactggagtggatggtgcagctg
tgtggggcttctgtggtgaaggagctttcatcattcacccttggcacaggtatccacgca
gttgtggttgtgcagccagatgcctggacagaggacaacggcttacatgcaattgggcag
atgtgtgaggcgcctgtggtgactcgagagtgggtgttggacagtgtagcactctaccag
tgccaggagctggacacctacctgataccccagatcccccacagccactactga
DBGET
integrated database retrieval system
